{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 115622576, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 113917735, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.53, 
            "paired": 115622576, 
            "paired_qc_failed": 0, 
            "read1": 57811288, 
            "read1_qc_failed": 0, 
            "read2": 57811288, 
            "read2_qc_failed": 0, 
            "paired_properly": 113075328, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.8, 
            "with_itself": 113371827, 
            "with_itself_qc_failed": 0, 
            "singletons": 545908, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.47, 
            "diff_chroms": 118987, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 116616760, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 115340967, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.91, 
            "paired": 116616760, 
            "paired_qc_failed": 0, 
            "read1": 58308380, 
            "read1_qc_failed": 0, 
            "read2": 58308380, 
            "read2_qc_failed": 0, 
            "paired_properly": 112618961, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.57, 
            "with_itself": 114670631, 
            "with_itself_qc_failed": 0, 
            "singletons": 670336, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.57, 
            "diff_chroms": 1356484, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 49610418, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 9163211, 
            "paired_opt_dupes": 41716, 
            "dupes_pct": 0.184703
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 46805405, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 2581950, 
            "paired_opt_dupes": 44282, 
            "dupes_pct": 0.055164
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 49609259, 
            "distinct_read_pairs": 40446256, 
            "one_read_pair": 32722973, 
            "two_read_pair": 6487872, 
            "NRF": 0.815297, 
            "PBC1": 0.809048, 
            "PBC2": 5.043714
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 46788318, 
            "distinct_read_pairs": 44207269, 
            "one_read_pair": 41662261, 
            "two_read_pair": 2510205, 
            "NRF": 0.944836, 
            "PBC1": 0.94243, 
            "PBC2": 16.597155
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 80894414, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 80894414, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 80894414, 
            "paired_qc_failed": 0, 
            "read1": 40447207, 
            "read1_qc_failed": 0, 
            "read2": 40447207, 
            "read2_qc_failed": 0, 
            "paired_properly": 80894414, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 80894414, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 88446910, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 88446910, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 88446910, 
            "paired_qc_failed": 0, 
            "read1": 44223455, 
            "read1_qc_failed": 0, 
            "read2": 44223455, 
            "read2_qc_failed": 0, 
            "paired_properly": 88446910, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 88446910, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 106926, 
        "Np": 0, 
        "N_opt": 106926, 
        "N_consv": 106926, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.221747176743566, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2169449, 
            "argmin_corr": 1500, 
            "min_corr": 0.1888051, 
            "NSC": 1.174476, 
            "RSC": 1.17066
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.581216553146
        }, 
        "rep1-pr1": {
            "FRiP": 0.554358776743
        }, 
        "rep1-pr2": {
            "FRiP": 0.554111263104
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.543617893829
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.137601878912, 
            "auc": 0.494465498306, 
            "ch_div": 0.148424489241, 
            "elbow_pt": 3.2051137664e-280, 
            "jsd": 0.817390296029, 
            "syn_auc": 0.509840818424, 
            "syn_elbow_pt": 0.429085111685, 
            "syn_jsd": 0.526471562074
        }
    ]
}