{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 185387072, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 180046192, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.12, 
            "paired": 185387072, 
            "paired_qc_failed": 0, 
            "read1": 92693536, 
            "read1_qc_failed": 0, 
            "read2": 92693536, 
            "read2_qc_failed": 0, 
            "paired_properly": 173922091, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 93.82, 
            "with_itself": 177619989, 
            "with_itself_qc_failed": 0, 
            "singletons": 2426203, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.31, 
            "diff_chroms": 1543069, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 249846494, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 245693039, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.34, 
            "paired": 249846494, 
            "paired_qc_failed": 0, 
            "read1": 124923247, 
            "read1_qc_failed": 0, 
            "read2": 124923247, 
            "read2_qc_failed": 0, 
            "paired_properly": 234957962, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.04, 
            "with_itself": 243593650, 
            "with_itself_qc_failed": 0, 
            "singletons": 2099389, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.84, 
            "diff_chroms": 6531607, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 61025724, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 5039317, 
            "paired_opt_dupes": 41236, 
            "dupes_pct": 0.082577
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 98092949, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 7176563, 
            "paired_opt_dupes": 57044, 
            "dupes_pct": 0.073161
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 61024943, 
            "distinct_read_pairs": 55985695, 
            "one_read_pair": 51298254, 
            "two_read_pair": 4360067, 
            "NRF": 0.917423, 
            "PBC1": 0.916274, 
            "PBC2": 11.765474
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 98012771, 
            "distinct_read_pairs": 90842894, 
            "one_read_pair": 84087873, 
            "two_read_pair": 6363556, 
            "NRF": 0.926848, 
            "PBC1": 0.925641, 
            "PBC2": 13.213975
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 111972814, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 111972814, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 111972814, 
            "paired_qc_failed": 0, 
            "read1": 55986407, 
            "read1_qc_failed": 0, 
            "read2": 55986407, 
            "read2_qc_failed": 0, 
            "paired_properly": 111972814, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 111972814, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 181832772, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 181832772, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 181832772, 
            "paired_qc_failed": 0, 
            "read1": 90916386, 
            "read1_qc_failed": 0, 
            "read2": 90916386, 
            "read2_qc_failed": 0, 
            "paired_properly": 181832772, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 181832772, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 199767, 
        "Np": 0, 
        "N_opt": 199767, 
        "N_consv": 199767, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 0, 
            "corr_est_frag_len": 0.191143571893759, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2260626, 
            "argmin_corr": 1500, 
            "min_corr": 0.1814033, 
            "NSC": 1.053694, 
            "RSC": 0.2181015
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.370940362534
        }, 
        "rep1-pr1": {
            "FRiP": 0.32306285877
        }, 
        "rep1-pr2": {
            "FRiP": 0.322324056571
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.282328253673
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.230668289166, 
            "auc": 0.495299071651, 
            "ch_div": 0.113543403423, 
            "elbow_pt": 0.0, 
            "jsd": 0.640607819853, 
            "syn_auc": 0.507462898083, 
            "syn_elbow_pt": 0.248363416555, 
            "syn_jsd": 0.358978319422
        }
    ]
}