{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 193627840, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 187767359, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.97, 
            "paired": 193627840, 
            "paired_qc_failed": 0, 
            "read1": 96813920, 
            "read1_qc_failed": 0, 
            "read2": 96813920, 
            "read2_qc_failed": 0, 
            "paired_properly": 181682655, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 93.83, 
            "with_itself": 185311527, 
            "with_itself_qc_failed": 0, 
            "singletons": 2455832, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.27, 
            "diff_chroms": 1608045, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 202350424, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 198649849, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.17, 
            "paired": 202350424, 
            "paired_qc_failed": 0, 
            "read1": 101175212, 
            "read1_qc_failed": 0, 
            "read2": 101175212, 
            "read2_qc_failed": 0, 
            "paired_properly": 191032553, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.41, 
            "with_itself": 196787032, 
            "with_itself_qc_failed": 0, 
            "singletons": 1862817, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.92, 
            "diff_chroms": 4083046, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 66169751, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 5204161, 
            "paired_opt_dupes": 51463, 
            "dupes_pct": 0.078649
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 79868417, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3252613, 
            "paired_opt_dupes": 36998, 
            "dupes_pct": 0.040725
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 66168146, 
            "distinct_read_pairs": 60964100, 
            "one_read_pair": 56111772, 
            "two_read_pair": 4523420, 
            "NRF": 0.921351, 
            "PBC1": 0.920407, 
            "PBC2": 12.404723
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 79802498, 
            "distinct_read_pairs": 76553268, 
            "one_read_pair": 73415319, 
            "two_read_pair": 3032014, 
            "NRF": 0.959284, 
            "PBC1": 0.95901, 
            "PBC2": 24.213384
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 121931180, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 121931180, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 121931180, 
            "paired_qc_failed": 0, 
            "read1": 60965590, 
            "read1_qc_failed": 0, 
            "read2": 60965590, 
            "read2_qc_failed": 0, 
            "paired_properly": 121931180, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 121931180, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 153231608, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 153231608, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 153231608, 
            "paired_qc_failed": 0, 
            "read1": 76615804, 
            "read1_qc_failed": 0, 
            "read2": 76615804, 
            "read2_qc_failed": 0, 
            "paired_properly": 153231608, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 153231608, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 181571, 
        "Np": 0, 
        "N_opt": 181571, 
        "N_consv": 181571, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 110, 
            "corr_est_frag_len": 0.192516857657762, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2244936, 
            "argmin_corr": 1500, 
            "min_corr": 0.1852104, 
            "NSC": 1.039449, 
            "RSC": 0.1859934
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.269320386916
        }, 
        "rep1-pr1": {
            "FRiP": 0.243569461372
        }, 
        "rep1-pr2": {
            "FRiP": 0.243293151215
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.190334639567
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.239294939555, 
            "auc": 0.495487493309, 
            "ch_div": 0.109143251267, 
            "elbow_pt": 0.0, 
            "jsd": 0.612017073, 
            "syn_auc": 0.508294318683, 
            "syn_elbow_pt": 0.220257151993, 
            "syn_jsd": 0.348006388999
        }
    ]
}