Sample K009037_K009038_K009039_K009040_K009041_K009042_5_lane_gembs
===================================================================

Mapping Stats (Reads)
---------------------

+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Reads                                 |%                                           |P1 Reads                                    |%                                           |P2 Reads                                    |%                                          |
+============================================+============================================+============================================+============================================+============================================+============================================+===========================================+
|Sequenced Reads                             |1124348021                                  |100.00 %                                    |654782258                                   |100.00 %                                    |469565763                                   |100.00 %                                   |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|General Reads                               |1095023610                                  |97.39 %                                     |639777322                                   |97.71 %                                     |455246288                                   |96.95 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads in Control sequences                  |0                                           |0.00 %                                      |0                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads under conversion control              |1012                                        |0.00 %                                      |531                                         |0.00 %                                      |481                                         |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads over conversion control               |0                                           |0.00 %                                      |0                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Unmapped reads                              |29323399                                    |2.61 %                                      |15004405                                    |2.29 %                                      |14318994                                    |3.05 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Bisulfite_reads C2T                         |569345541                                   |50.64 %                                     |331542933                                   |50.63 %                                     |237802608                                   |50.64 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Bisulfite_reads G2A                         |525679081                                   |46.75 %                                     |308234920                                   |47.07 %                                     |217444161                                   |46.31 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+

Uniqueness (Fragments)
----------------------

+--------------------------------------------+-------------------------------------------+
|Concept                                     |Value                                      |
+============================================+===========================================+
|Unique Fragments                            |293029094                                  |
+--------------------------------------------+-------------------------------------------+
|Average Unique                              |45.07 %                                    |
+--------------------------------------------+-------------------------------------------+

Mapping Stats (Bases)
---------------------

+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Bases                                 |%                                           |P1 Bases                                    |%                                           |P2 Bases                                    |%                                          |
+============================================+============================================+============================================+============================================+============================================+============================================+===========================================+
|Base Counts Overall A                       |27177226121                                 |36.84 %                                     |12392414240                                 |29.19 %                                     |14784811881                                 |47.20 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall C                       |7072739082                                  |9.59 %                                      |468075851                                   |1.10 %                                      |6604663231                                  |21.09 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall G                       |9351680083                                  |12.68 %                                     |9049910562                                  |21.31 %                                     |301769521                                   |0.96 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall T                       |29004862430                                 |39.31 %                                     |19888421394                                 |46.84 %                                     |9116441036                                  |29.11 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall N                       |1173969064                                  |1.59 %                                      |660867283                                   |1.56 %                                      |513101781                                   |1.64 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+

Mapping Quality Histogram
-------------------------

.. image:: K009037_K009038_K009039_K009040_K009041_K009042_5_lane_gembs_mapq.png

Bisulfite Conversion Rate
-------------------------

+--------------------------------------------+-------------------------------------------+
|Bisulfite Conversion Type                   |Conversion Rate                            |
+============================================+===========================================+
|Under Conversion Rate                       |0.06623201206606036                        |
+--------------------------------------------+-------------------------------------------+
|Over Conversion Rate                        |NA                                         |
+--------------------------------------------+-------------------------------------------+

Insert Size Histogram
---------------------

.. image:: K009037_K009038_K009039_K009040_K009041_K009042_5_lane_gembs_isize.png

Correct Pairs
-------------

+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Reads                                |
+============================================+===========================================+
|Correct Pairs                               |234104831                                  |
+--------------------------------------------+-------------------------------------------+

Sample K009037_K009038_K009039_K009040_K009041_K009042_5_lane_gembs Lane 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612555.51
---------------------------------------------------------------------------------------------------------------------------------

Mapping Stats (Reads)
^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Reads                                 |%                                           |P1 Reads                                    |%                                           |P2 Reads                                    |%                                          |
+============================================+============================================+============================================+============================================+============================================+============================================+===========================================+
|Sequenced Reads                             |302800888                                   |100.00 %                                    |151400444                                   |100.00 %                                    |151400444                                   |100.00 %                                   |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|General Reads                               |294840074                                   |97.37 %                                     |147759398                                   |97.60 %                                     |147080676                                   |97.15 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads in Control sequences                  |0                                           |0.00 %                                      |0                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads under conversion control              |325                                         |0.00 %                                      |172                                         |0.00 %                                      |153                                         |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads over conversion control               |0                                           |0.00 %                                      |0                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Unmapped reads                              |7960489                                     |2.63 %                                      |3640874                                     |2.40 %                                      |4319615                                     |2.85 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Bisulfite_reads C2T                         |152689676                                   |50.43 %                                     |76519810                                    |50.54 %                                     |76169866                                    |50.31 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Bisulfite_reads G2A                         |142150723                                   |46.95 %                                     |71239760                                    |47.05 %                                     |70910963                                    |46.84 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+

Uniqueness (Fragments)
^^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Concept                                     |Value                                      |
+============================================+===========================================+
|Unique Fragments                            |34412005                                   |
+--------------------------------------------+-------------------------------------------+
|Average Unique                              |22.73 %                                    |
+--------------------------------------------+-------------------------------------------+

Mapping Stats (Bases)
^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Bases                                 |%                                           |P1 Bases                                    |%                                           |P2 Bases                                    |%                                          |
+============================================+============================================+============================================+============================================+============================================+============================================+===========================================+
|Base Counts Overall A                       |8278070017                                  |38.43 %                                     |3076049851                                  |29.21 %                                     |5202020166                                  |47.25 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall C                       |2437647962                                  |11.32 %                                     |122758611                                   |1.17 %                                      |2314889351                                  |21.03 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall G                       |2344138552                                  |10.88 %                                     |2245420623                                  |21.33 %                                     |98717929                                    |0.90 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall T                       |8147964853                                  |37.83 %                                     |4931616408                                  |46.84 %                                     |3216348445                                  |29.21 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall N                       |330868348                                   |1.54 %                                      |153606258                                   |1.46 %                                      |177262090                                   |1.61 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+

Bisulfite Conversion Rate
^^^^^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Bisulfite Conversion Type                   |Conversion Rate                            |
+============================================+===========================================+
|Under Conversion Rate                       |0.06192305918545054                        |
+--------------------------------------------+-------------------------------------------+
|Over Conversion Rate                        |NA                                         |
+--------------------------------------------+-------------------------------------------+

Correct Pairs
^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Reads                                |
+============================================+===========================================+
|Correct Pairs                               |57207565                                   |
+--------------------------------------------+-------------------------------------------+

Mapping Quality Histogram
^^^^^^^^^^^^^^^^^^^^^^^^^

.. image:: 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612555.51_mapq.png

Read Length
^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Read Length                                 |Reads                                      |
+============================================+===========================================+
|78                                          |1780928                                    |
+--------------------------------------------+-------------------------------------------+
|89                                          |2088602                                    |
+--------------------------------------------+-------------------------------------------+
|41                                          |1816053                                    |
+--------------------------------------------+-------------------------------------------+
|54                                          |2531875                                    |
+--------------------------------------------+-------------------------------------------+
|28                                          |322194                                     |
+--------------------------------------------+-------------------------------------------+
|65                                          |2244613                                    |
+--------------------------------------------+-------------------------------------------+
|31                                          |382677                                     |
+--------------------------------------------+-------------------------------------------+
|46                                          |2494044                                    |
+--------------------------------------------+-------------------------------------------+
|22                                          |239919                                     |
+--------------------------------------------+-------------------------------------------+
|82                                          |1451998                                    |
+--------------------------------------------+-------------------------------------------+
|56                                          |2516486                                    |
+--------------------------------------------+-------------------------------------------+
|98                                          |12051291                                   |
+--------------------------------------------+-------------------------------------------+
|87                                          |1387331                                    |
+--------------------------------------------+-------------------------------------------+
|67                                          |2209312                                    |
+--------------------------------------------+-------------------------------------------+
|69                                          |2085900                                    |
+--------------------------------------------+-------------------------------------------+
|48                                          |2494138                                    |
+--------------------------------------------+-------------------------------------------+
|68                                          |2106021                                    |
+--------------------------------------------+-------------------------------------------+
|71                                          |1936148                                    |
+--------------------------------------------+-------------------------------------------+
|52                                          |2505937                                    |
+--------------------------------------------+-------------------------------------------+
|84                                          |1191389                                    |
+--------------------------------------------+-------------------------------------------+
|32                                          |402220                                     |
+--------------------------------------------+-------------------------------------------+
|86                                          |1299988                                    |
+--------------------------------------------+-------------------------------------------+
|59                                          |2333834                                    |
+--------------------------------------------+-------------------------------------------+
|73                                          |1884998                                    |
+--------------------------------------------+-------------------------------------------+
|95                                          |1825023                                    |
+--------------------------------------------+-------------------------------------------+
|42                                          |2052675                                    |
+--------------------------------------------+-------------------------------------------+
|70                                          |2010448                                    |
+--------------------------------------------+-------------------------------------------+
|96                                          |3008605                                    |
+--------------------------------------------+-------------------------------------------+
|45                                          |2411241                                    |
+--------------------------------------------+-------------------------------------------+
|97                                          |10548690                                   |
+--------------------------------------------+-------------------------------------------+
|51                                          |2436364                                    |
+--------------------------------------------+-------------------------------------------+
|64                                          |2258417                                    |
+--------------------------------------------+-------------------------------------------+
|38                                          |1364848                                    |
+--------------------------------------------+-------------------------------------------+
|49                                          |2459212                                    |
+--------------------------------------------+-------------------------------------------+
|33                                          |471622                                     |
+--------------------------------------------+-------------------------------------------+
|40                                          |1633661                                    |
+--------------------------------------------+-------------------------------------------+
|43                                          |2200621                                    |
+--------------------------------------------+-------------------------------------------+
|30                                          |351612                                     |
+--------------------------------------------+-------------------------------------------+
|90                                          |4521425                                    |
+--------------------------------------------+-------------------------------------------+
|85                                          |1258288                                    |
+--------------------------------------------+-------------------------------------------+
|62                                          |2304426                                    |
+--------------------------------------------+-------------------------------------------+
|72                                          |1939187                                    |
+--------------------------------------------+-------------------------------------------+
|79                                          |1786270                                    |
+--------------------------------------------+-------------------------------------------+
|77                                          |1871887                                    |
+--------------------------------------------+-------------------------------------------+
|75                                          |1908186                                    |
+--------------------------------------------+-------------------------------------------+
|74                                          |1904534                                    |
+--------------------------------------------+-------------------------------------------+
|36                                          |1007248                                    |
+--------------------------------------------+-------------------------------------------+
|66                                          |2201251                                    |
+--------------------------------------------+-------------------------------------------+
|81                                          |1568245                                    |
+--------------------------------------------+-------------------------------------------+
|34                                          |628600                                     |
+--------------------------------------------+-------------------------------------------+
|23                                          |258691                                     |
+--------------------------------------------+-------------------------------------------+
|63                                          |2247254                                    |
+--------------------------------------------+-------------------------------------------+
|27                                          |313647                                     |
+--------------------------------------------+-------------------------------------------+
|47                                          |2554717                                    |
+--------------------------------------------+-------------------------------------------+
|83                                          |1154729                                    |
+--------------------------------------------+-------------------------------------------+
|26                                          |320701                                     |
+--------------------------------------------+-------------------------------------------+
|60                                          |2308783                                    |
+--------------------------------------------+-------------------------------------------+
|80                                          |1699857                                    |
+--------------------------------------------+-------------------------------------------+
|21                                          |261630                                     |
+--------------------------------------------+-------------------------------------------+
|93                                          |1367140                                    |
+--------------------------------------------+-------------------------------------------+
|39                                          |1505361                                    |
+--------------------------------------------+-------------------------------------------+
|29                                          |333366                                     |
+--------------------------------------------+-------------------------------------------+
|50                                          |2439027                                    |
+--------------------------------------------+-------------------------------------------+
|57                                          |2497528                                    |
+--------------------------------------------+-------------------------------------------+
|92                                          |325697                                     |
+--------------------------------------------+-------------------------------------------+
|37                                          |1206946                                    |
+--------------------------------------------+-------------------------------------------+
|24                                          |267776                                     |
+--------------------------------------------+-------------------------------------------+
|25                                          |286485                                     |
+--------------------------------------------+-------------------------------------------+
|53                                          |2483906                                    |
+--------------------------------------------+-------------------------------------------+
|20                                          |243145                                     |
+--------------------------------------------+-------------------------------------------+
|44                                          |2320523                                    |
+--------------------------------------------+-------------------------------------------+
|61                                          |2243813                                    |
+--------------------------------------------+-------------------------------------------+
|91                                          |2728093                                    |
+--------------------------------------------+-------------------------------------------+
|76                                          |1868222                                    |
+--------------------------------------------+-------------------------------------------+
|35                                          |808537                                     |
+--------------------------------------------+-------------------------------------------+
|55                                          |2552807                                    |
+--------------------------------------------+-------------------------------------------+
|94                                          |1087653                                    |
+--------------------------------------------+-------------------------------------------+
|88                                          |1625803                                    |
+--------------------------------------------+-------------------------------------------+
|58                                          |2398125                                    |
+--------------------------------------------+-------------------------------------------+
|78                                          |1657291                                    |
+--------------------------------------------+-------------------------------------------+
|89                                          |1257467                                    |
+--------------------------------------------+-------------------------------------------+
|41                                          |1694326                                    |
+--------------------------------------------+-------------------------------------------+
|54                                          |2395354                                    |
+--------------------------------------------+-------------------------------------------+
|28                                          |177784                                     |
+--------------------------------------------+-------------------------------------------+
|65                                          |2111579                                    |
+--------------------------------------------+-------------------------------------------+
|31                                          |220049                                     |
+--------------------------------------------+-------------------------------------------+
|46                                          |2376582                                    |
+--------------------------------------------+-------------------------------------------+
|22                                          |82753                                      |
+--------------------------------------------+-------------------------------------------+
|82                                          |1450448                                    |
+--------------------------------------------+-------------------------------------------+
|56                                          |2378394                                    |
+--------------------------------------------+-------------------------------------------+
|98                                          |8308677                                    |
+--------------------------------------------+-------------------------------------------+
|87                                          |1325843                                    |
+--------------------------------------------+-------------------------------------------+
|67                                          |2076659                                    |
+--------------------------------------------+-------------------------------------------+
|69                                          |1955385                                    |
+--------------------------------------------+-------------------------------------------+
|48                                          |2371397                                    |
+--------------------------------------------+-------------------------------------------+
|68                                          |1971372                                    |
+--------------------------------------------+-------------------------------------------+
|71                                          |1789341                                    |
+--------------------------------------------+-------------------------------------------+
|52                                          |2366111                                    |
+--------------------------------------------+-------------------------------------------+
|84                                          |1344403                                    |
+--------------------------------------------+-------------------------------------------+
|32                                          |261251                                     |
+--------------------------------------------+-------------------------------------------+
|86                                          |1319812                                    |
+--------------------------------------------+-------------------------------------------+
|59                                          |2189416                                    |
+--------------------------------------------+-------------------------------------------+
|73                                          |1743089                                    |
+--------------------------------------------+-------------------------------------------+
|95                                          |2019579                                    |
+--------------------------------------------+-------------------------------------------+
|42                                          |1924747                                    |
+--------------------------------------------+-------------------------------------------+
|70                                          |1875482                                    |
+--------------------------------------------+-------------------------------------------+
|96                                          |3584726                                    |
+--------------------------------------------+-------------------------------------------+
|45                                          |2335330                                    |
+--------------------------------------------+-------------------------------------------+
|97                                          |3558253                                    |
+--------------------------------------------+-------------------------------------------+
|51                                          |2292394                                    |
+--------------------------------------------+-------------------------------------------+
|64                                          |2121196                                    |
+--------------------------------------------+-------------------------------------------+
|38                                          |1241141                                    |
+--------------------------------------------+-------------------------------------------+
|49                                          |2320876                                    |
+--------------------------------------------+-------------------------------------------+
|33                                          |321415                                     |
+--------------------------------------------+-------------------------------------------+
|40                                          |1514369                                    |
+--------------------------------------------+-------------------------------------------+
|43                                          |2078620                                    |
+--------------------------------------------+-------------------------------------------+
|30                                          |206992                                     |
+--------------------------------------------+-------------------------------------------+
|90                                          |1264072                                    |
+--------------------------------------------+-------------------------------------------+
|85                                          |1342617                                    |
+--------------------------------------------+-------------------------------------------+
|62                                          |2157977                                    |
+--------------------------------------------+-------------------------------------------+
|72                                          |1798252                                    |
+--------------------------------------------+-------------------------------------------+
|79                                          |1614504                                    |
+--------------------------------------------+-------------------------------------------+
|77                                          |1736796                                    |
+--------------------------------------------+-------------------------------------------+
|75                                          |1771958                                    |
+--------------------------------------------+-------------------------------------------+
|74                                          |1766480                                    |
+--------------------------------------------+-------------------------------------------+
|36                                          |875731                                     |
+--------------------------------------------+-------------------------------------------+
|66                                          |2065489                                    |
+--------------------------------------------+-------------------------------------------+
|81                                          |1469564                                    |
+--------------------------------------------+-------------------------------------------+
|34                                          |485321                                     |
+--------------------------------------------+-------------------------------------------+
|23                                          |89632                                      |
+--------------------------------------------+-------------------------------------------+
|63                                          |2107816                                    |
+--------------------------------------------+-------------------------------------------+
|27                                          |160018                                     |
+--------------------------------------------+-------------------------------------------+
|47                                          |2434615                                    |
+--------------------------------------------+-------------------------------------------+
|83                                          |1344000                                    |
+--------------------------------------------+-------------------------------------------+
|26                                          |148042                                     |
+--------------------------------------------+-------------------------------------------+
|60                                          |2174356                                    |
+--------------------------------------------+-------------------------------------------+
|80                                          |1529124                                    |
+--------------------------------------------+-------------------------------------------+
|21                                          |78034                                      |
+--------------------------------------------+-------------------------------------------+
|93                                          |1217193                                    |
+--------------------------------------------+-------------------------------------------+
|39                                          |1374067                                    |
+--------------------------------------------+-------------------------------------------+
|29                                          |188879                                     |
+--------------------------------------------+-------------------------------------------+
|50                                          |2295160                                    |
+--------------------------------------------+-------------------------------------------+
|57                                          |2354967                                    |
+--------------------------------------------+-------------------------------------------+
|92                                          |1150738                                    |
+--------------------------------------------+-------------------------------------------+
|37                                          |1084998                                    |
+--------------------------------------------+-------------------------------------------+
|99                                          |23238303                                   |
+--------------------------------------------+-------------------------------------------+
|24                                          |106394                                     |
+--------------------------------------------+-------------------------------------------+
|25                                          |127009                                     |
+--------------------------------------------+-------------------------------------------+
|53                                          |2346600                                    |
+--------------------------------------------+-------------------------------------------+
|20                                          |77698                                      |
+--------------------------------------------+-------------------------------------------+
|44                                          |2208670                                    |
+--------------------------------------------+-------------------------------------------+
|61                                          |2104480                                    |
+--------------------------------------------+-------------------------------------------+
|91                                          |1196851                                    |
+--------------------------------------------+-------------------------------------------+
|76                                          |1731936                                    |
+--------------------------------------------+-------------------------------------------+
|35                                          |673338                                     |
+--------------------------------------------+-------------------------------------------+
|55                                          |2414809                                    |
+--------------------------------------------+-------------------------------------------+
|94                                          |1335964                                    |
+--------------------------------------------+-------------------------------------------+
|88                                          |1278315                                    |
+--------------------------------------------+-------------------------------------------+
|58                                          |2259774                                    |
+--------------------------------------------+-------------------------------------------+

Insert Size Histogram
^^^^^^^^^^^^^^^^^^^^^

.. image:: 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612555.51_isize.png

Sample K009037_K009038_K009039_K009040_K009041_K009042_5_lane_gembs Lane 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612531.51
---------------------------------------------------------------------------------------------------------------------------------

Mapping Stats (Reads)
^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Reads                                 |%                                           |P1 Reads                                    |%                                           |P2 Reads                                    |%                                          |
+============================================+============================================+============================================+============================================+============================================+============================================+===========================================+
|Sequenced Reads                             |40353634                                    |100.00 %                                    |40353634                                    |100.00 %                                    |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|General Reads                               |39230555                                    |97.22 %                                     |39230555                                    |97.22 %                                     |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads in Control sequences                  |0                                           |0.00 %                                      |0                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads under conversion control              |6                                           |0.00 %                                      |6                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads over conversion control               |0                                           |0.00 %                                      |0                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Unmapped reads                              |1123073                                     |2.78 %                                      |1123073                                     |2.78 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Bisulfite_reads C2T                         |19925385                                    |49.38 %                                     |19925385                                    |49.38 %                                     |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Bisulfite_reads G2A                         |19305176                                    |47.84 %                                     |19305176                                    |47.84 %                                     |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+

Uniqueness (Fragments)
^^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Concept                                     |Value                                      |
+============================================+===========================================+
|Unique Fragments                            |30065685                                   |
+--------------------------------------------+-------------------------------------------+
|Average Unique                              |76.64 %                                    |
+--------------------------------------------+-------------------------------------------+

Mapping Stats (Bases)
^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Bases                                 |%                                           |P1 Bases                                    |%                                           |P2 Bases                                    |%                                          |
+============================================+============================================+============================================+============================================+============================================+============================================+===========================================+
|Base Counts Overall A                       |800827516                                   |29.29 %                                    |
+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall C                       |25057408                                    |0.92 %                                     |
+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall G                       |581496296                                   |21.27 %                                    |
+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall T                       |1284907786                                  |47.00 %                                    |
+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall N                       |41481051                                    |1.52 %                                     |
+--------------------------------------------+--------------------------------------------+-------------------------------------------+

Bisulfite Conversion Rate
^^^^^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Bisulfite Conversion Type                   |Conversion Rate                            |
+============================================+===========================================+
|Under Conversion Rate                       |NA                                         |
+--------------------------------------------+-------------------------------------------+
|Over Conversion Rate                        |NA                                         |
+--------------------------------------------+-------------------------------------------+

Mapping Quality Histogram
^^^^^^^^^^^^^^^^^^^^^^^^^

.. image:: 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612531.51_mapq.png

Read Length
^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Read Length                                 |Reads                                      |
+============================================+===========================================+
|78                                          |374765                                     |
+--------------------------------------------+-------------------------------------------+
|89                                          |583128                                     |
+--------------------------------------------+-------------------------------------------+
|41                                          |490838                                     |
+--------------------------------------------+-------------------------------------------+
|54                                          |680153                                     |
+--------------------------------------------+-------------------------------------------+
|28                                          |96735                                      |
+--------------------------------------------+-------------------------------------------+
|65                                          |608501                                     |
+--------------------------------------------+-------------------------------------------+
|31                                          |116433                                     |
+--------------------------------------------+-------------------------------------------+
|46                                          |670499                                     |
+--------------------------------------------+-------------------------------------------+
|22                                          |73736                                      |
+--------------------------------------------+-------------------------------------------+
|82                                          |510011                                     |
+--------------------------------------------+-------------------------------------------+
|56                                          |675506                                     |
+--------------------------------------------+-------------------------------------------+
|87                                          |445598                                     |
+--------------------------------------------+-------------------------------------------+
|67                                          |595594                                     |
+--------------------------------------------+-------------------------------------------+
|69                                          |561674                                     |
+--------------------------------------------+-------------------------------------------+
|48                                          |667356                                     |
+--------------------------------------------+-------------------------------------------+
|68                                          |566362                                     |
+--------------------------------------------+-------------------------------------------+
|71                                          |522707                                     |
+--------------------------------------------+-------------------------------------------+
|52                                          |674604                                     |
+--------------------------------------------+-------------------------------------------+
|84                                          |1486515                                    |
+--------------------------------------------+-------------------------------------------+
|32                                          |118957                                     |
+--------------------------------------------+-------------------------------------------+
|86                                          |102133                                     |
+--------------------------------------------+-------------------------------------------+
|59                                          |624984                                     |
+--------------------------------------------+-------------------------------------------+
|73                                          |524393                                     |
+--------------------------------------------+-------------------------------------------+
|42                                          |549635                                     |
+--------------------------------------------+-------------------------------------------+
|70                                          |542305                                     |
+--------------------------------------------+-------------------------------------------+
|45                                          |646647                                     |
+--------------------------------------------+-------------------------------------------+
|51                                          |653303                                     |
+--------------------------------------------+-------------------------------------------+
|64                                          |613952                                     |
+--------------------------------------------+-------------------------------------------+
|38                                          |372575                                     |
+--------------------------------------------+-------------------------------------------+
|49                                          |661606                                     |
+--------------------------------------------+-------------------------------------------+
|33                                          |137564                                     |
+--------------------------------------------+-------------------------------------------+
|40                                          |442553                                     |
+--------------------------------------------+-------------------------------------------+
|43                                          |590508                                     |
+--------------------------------------------+-------------------------------------------+
|30                                          |105586                                     |
+--------------------------------------------+-------------------------------------------+
|90                                          |971922                                     |
+--------------------------------------------+-------------------------------------------+
|85                                          |892446                                     |
+--------------------------------------------+-------------------------------------------+
|62                                          |624200                                     |
+--------------------------------------------+-------------------------------------------+
|72                                          |522541                                     |
+--------------------------------------------+-------------------------------------------+
|79                                          |389039                                     |
+--------------------------------------------+-------------------------------------------+
|77                                          |382388                                     |
+--------------------------------------------+-------------------------------------------+
|75                                          |503627                                     |
+--------------------------------------------+-------------------------------------------+
|74                                          |527261                                     |
+--------------------------------------------+-------------------------------------------+
|36                                          |278265                                     |
+--------------------------------------------+-------------------------------------------+
|66                                          |595333                                     |
+--------------------------------------------+-------------------------------------------+
|81                                          |411096                                     |
+--------------------------------------------+-------------------------------------------+
|34                                          |178487                                     |
+--------------------------------------------+-------------------------------------------+
|23                                          |79147                                      |
+--------------------------------------------+-------------------------------------------+
|63                                          |608860                                     |
+--------------------------------------------+-------------------------------------------+
|27                                          |94324                                      |
+--------------------------------------------+-------------------------------------------+
|47                                          |684238                                     |
+--------------------------------------------+-------------------------------------------+
|83                                          |665435                                     |
+--------------------------------------------+-------------------------------------------+
|26                                          |97000                                      |
+--------------------------------------------+-------------------------------------------+
|60                                          |621718                                     |
+--------------------------------------------+-------------------------------------------+
|80                                          |394491                                     |
+--------------------------------------------+-------------------------------------------+
|21                                          |80358                                      |
+--------------------------------------------+-------------------------------------------+
|39                                          |409255                                     |
+--------------------------------------------+-------------------------------------------+
|29                                          |100678                                     |
+--------------------------------------------+-------------------------------------------+
|50                                          |657026                                     |
+--------------------------------------------+-------------------------------------------+
|57                                          |671054                                     |
+--------------------------------------------+-------------------------------------------+
|92                                          |3602472                                    |
+--------------------------------------------+-------------------------------------------+
|37                                          |330772                                     |
+--------------------------------------------+-------------------------------------------+
|24                                          |83102                                      |
+--------------------------------------------+-------------------------------------------+
|25                                          |86917                                      |
+--------------------------------------------+-------------------------------------------+
|53                                          |667192                                     |
+--------------------------------------------+-------------------------------------------+
|20                                          |74465                                      |
+--------------------------------------------+-------------------------------------------+
|44                                          |621608                                     |
+--------------------------------------------+-------------------------------------------+
|61                                          |605234                                     |
+--------------------------------------------+-------------------------------------------+
|91                                          |3388505                                    |
+--------------------------------------------+-------------------------------------------+
|76                                          |456923                                     |
+--------------------------------------------+-------------------------------------------+
|35                                          |224623                                     |
+--------------------------------------------+-------------------------------------------+
|55                                          |687745                                     |
+--------------------------------------------+-------------------------------------------+
|88                                          |351765                                     |
+--------------------------------------------+-------------------------------------------+
|58                                          |644706                                     |
+--------------------------------------------+-------------------------------------------+

Sample K009037_K009038_K009039_K009040_K009041_K009042_5_lane_gembs Lane 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612532.51
---------------------------------------------------------------------------------------------------------------------------------

Mapping Stats (Reads)
^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Reads                                 |%                                           |P1 Reads                                    |%                                           |P2 Reads                                    |%                                          |
+============================================+============================================+============================================+============================================+============================================+============================================+===========================================+
|Sequenced Reads                             |144862861                                   |100.00 %                                    |144862861                                   |100.00 %                                    |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|General Reads                               |141397069                                   |97.61 %                                     |141397069                                   |97.61 %                                     |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads in Control sequences                  |0                                           |0.00 %                                      |0                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads under conversion control              |11                                          |0.00 %                                      |11                                          |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads over conversion control               |0                                           |0.00 %                                      |0                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Unmapped reads                              |3465781                                     |2.39 %                                      |3465781                                     |2.39 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Bisulfite_reads C2T                         |71839085                                    |49.59 %                                     |71839085                                    |49.59 %                                     |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Bisulfite_reads G2A                         |69557995                                    |48.02 %                                     |69557995                                    |48.02 %                                     |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+

Uniqueness (Fragments)
^^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Concept                                     |Value                                      |
+============================================+===========================================+
|Unique Fragments                            |108936243                                  |
+--------------------------------------------+-------------------------------------------+
|Average Unique                              |77.04 %                                    |
+--------------------------------------------+-------------------------------------------+

Mapping Stats (Bases)
^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Bases                                 |%                                           |P1 Bases                                    |%                                           |P2 Bases                                    |%                                          |
+============================================+============================================+============================================+============================================+============================================+============================================+===========================================+
|Base Counts Overall A                       |2888968269                                  |29.19 %                                    |
+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall C                       |88866449                                    |0.90 %                                     |
+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall G                       |2105223402                                  |21.27 %                                    |
+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall T                       |4669150315                                  |47.17 %                                    |
+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall N                       |146297696                                   |1.48 %                                     |
+--------------------------------------------+--------------------------------------------+-------------------------------------------+

Bisulfite Conversion Rate
^^^^^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Bisulfite Conversion Type                   |Conversion Rate                            |
+============================================+===========================================+
|Under Conversion Rate                       |NA                                         |
+--------------------------------------------+-------------------------------------------+
|Over Conversion Rate                        |NA                                         |
+--------------------------------------------+-------------------------------------------+

Mapping Quality Histogram
^^^^^^^^^^^^^^^^^^^^^^^^^

.. image:: 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612532.51_mapq.png

Read Length
^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Read Length                                 |Reads                                      |
+============================================+===========================================+
|78                                          |1658028                                    |
+--------------------------------------------+-------------------------------------------+
|89                                          |308775                                     |
+--------------------------------------------+-------------------------------------------+
|41                                          |1805901                                    |
+--------------------------------------------+-------------------------------------------+
|54                                          |2463374                                    |
+--------------------------------------------+-------------------------------------------+
|28                                          |332019                                     |
+--------------------------------------------+-------------------------------------------+
|65                                          |2172563                                    |
+--------------------------------------------+-------------------------------------------+
|31                                          |395271                                     |
+--------------------------------------------+-------------------------------------------+
|46                                          |2453401                                    |
+--------------------------------------------+-------------------------------------------+
|22                                          |246769                                     |
+--------------------------------------------+-------------------------------------------+
|82                                          |1252935                                    |
+--------------------------------------------+-------------------------------------------+
|56                                          |2437900                                    |
+--------------------------------------------+-------------------------------------------+
|87                                          |4860068                                    |
+--------------------------------------------+-------------------------------------------+
|67                                          |2129838                                    |
+--------------------------------------------+-------------------------------------------+
|69                                          |1994699                                    |
+--------------------------------------------+-------------------------------------------+
|48                                          |2443091                                    |
+--------------------------------------------+-------------------------------------------+
|68                                          |2027787                                    |
+--------------------------------------------+-------------------------------------------+
|71                                          |1849662                                    |
+--------------------------------------------+-------------------------------------------+
|52                                          |2442137                                    |
+--------------------------------------------+-------------------------------------------+
|84                                          |1381461                                    |
+--------------------------------------------+-------------------------------------------+
|32                                          |410230                                     |
+--------------------------------------------+-------------------------------------------+
|86                                          |2176893                                    |
+--------------------------------------------+-------------------------------------------+
|59                                          |2253234                                    |
+--------------------------------------------+-------------------------------------------+
|73                                          |1803183                                    |
+--------------------------------------------+-------------------------------------------+
|95                                          |11978028                                   |
+--------------------------------------------+-------------------------------------------+
|42                                          |2031795                                    |
+--------------------------------------------+-------------------------------------------+
|70                                          |1920051                                    |
+--------------------------------------------+-------------------------------------------+
|45                                          |2375783                                    |
+--------------------------------------------+-------------------------------------------+
|51                                          |2374905                                    |
+--------------------------------------------+-------------------------------------------+
|64                                          |2190910                                    |
+--------------------------------------------+-------------------------------------------+
|38                                          |1365592                                    |
+--------------------------------------------+-------------------------------------------+
|49                                          |2404135                                    |
+--------------------------------------------+-------------------------------------------+
|33                                          |481131                                     |
+--------------------------------------------+-------------------------------------------+
|40                                          |1629253                                    |
+--------------------------------------------+-------------------------------------------+
|43                                          |2167472                                    |
+--------------------------------------------+-------------------------------------------+
|30                                          |362549                                     |
+--------------------------------------------+-------------------------------------------+
|90                                          |1367584                                    |
+--------------------------------------------+-------------------------------------------+
|85                                          |1688085                                    |
+--------------------------------------------+-------------------------------------------+
|62                                          |2222441                                    |
+--------------------------------------------+-------------------------------------------+
|72                                          |1852904                                    |
+--------------------------------------------+-------------------------------------------+
|79                                          |1506384                                    |
+--------------------------------------------+-------------------------------------------+
|77                                          |1820525                                    |
+--------------------------------------------+-------------------------------------------+
|75                                          |1824845                                    |
+--------------------------------------------+-------------------------------------------+
|74                                          |1824218                                    |
+--------------------------------------------+-------------------------------------------+
|36                                          |1016599                                    |
+--------------------------------------------+-------------------------------------------+
|66                                          |2131778                                    |
+--------------------------------------------+-------------------------------------------+
|81                                          |1191164                                    |
+--------------------------------------------+-------------------------------------------+
|34                                          |637729                                     |
+--------------------------------------------+-------------------------------------------+
|23                                          |267971                                     |
+--------------------------------------------+-------------------------------------------+
|63                                          |2173071                                    |
+--------------------------------------------+-------------------------------------------+
|27                                          |321285                                     |
+--------------------------------------------+-------------------------------------------+
|47                                          |2510753                                    |
+--------------------------------------------+-------------------------------------------+
|83                                          |1296749                                    |
+--------------------------------------------+-------------------------------------------+
|26                                          |328723                                     |
+--------------------------------------------+-------------------------------------------+
|60                                          |2224888                                    |
+--------------------------------------------+-------------------------------------------+
|80                                          |1185246                                    |
+--------------------------------------------+-------------------------------------------+
|21                                          |268077                                     |
+--------------------------------------------+-------------------------------------------+
|93                                          |3041124                                    |
+--------------------------------------------+-------------------------------------------+
|39                                          |1503779                                    |
+--------------------------------------------+-------------------------------------------+
|29                                          |345343                                     |
+--------------------------------------------+-------------------------------------------+
|50                                          |2380927                                    |
+--------------------------------------------+-------------------------------------------+
|57                                          |2416585                                    |
+--------------------------------------------+-------------------------------------------+
|92                                          |1826002                                    |
+--------------------------------------------+-------------------------------------------+
|37                                          |1212573                                    |
+--------------------------------------------+-------------------------------------------+
|24                                          |278237                                     |
+--------------------------------------------+-------------------------------------------+
|25                                          |295718                                     |
+--------------------------------------------+-------------------------------------------+
|53                                          |2413166                                    |
+--------------------------------------------+-------------------------------------------+
|20                                          |248710                                     |
+--------------------------------------------+-------------------------------------------+
|44                                          |2282118                                    |
+--------------------------------------------+-------------------------------------------+
|61                                          |2161526                                    |
+--------------------------------------------+-------------------------------------------+
|91                                          |1080266                                    |
+--------------------------------------------+-------------------------------------------+
|76                                          |1828673                                    |
+--------------------------------------------+-------------------------------------------+
|35                                          |814435                                     |
+--------------------------------------------+-------------------------------------------+
|55                                          |2478410                                    |
+--------------------------------------------+-------------------------------------------+
|94                                          |10843034                                   |
+--------------------------------------------+-------------------------------------------+
|88                                          |2847774                                    |
+--------------------------------------------+-------------------------------------------+
|58                                          |2322619                                    |
+--------------------------------------------+-------------------------------------------+

Sample K009037_K009038_K009039_K009040_K009041_K009042_5_lane_gembs Lane 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612554.51
---------------------------------------------------------------------------------------------------------------------------------

Mapping Stats (Reads)
^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Reads                                 |%                                           |P1 Reads                                    |%                                           |P2 Reads                                    |%                                          |
+============================================+============================================+============================================+============================================+============================================+============================================+===========================================+
|Sequenced Reads                             |366519710                                   |100.00 %                                    |183259855                                   |100.00 %                                    |183259855                                   |100.00 %                                   |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|General Reads                               |355199273                                   |96.91 %                                     |177981776                                   |97.12 %                                     |177217497                                   |96.70 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads in Control sequences                  |0                                           |0.00 %                                      |0                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads under conversion control              |655                                         |0.00 %                                      |335                                         |0.00 %                                      |320                                         |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads over conversion control               |0                                           |0.00 %                                      |0                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Unmapped reads                              |11319782                                    |3.09 %                                      |5277744                                     |2.88 %                                      |6042038                                     |3.30 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Bisulfite_reads C2T                         |183911336                                   |50.18 %                                     |92149534                                    |50.28 %                                     |91761802                                    |50.07 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Bisulfite_reads G2A                         |171288592                                   |46.73 %                                     |85832577                                    |46.84 %                                     |85456015                                    |46.63 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+

Uniqueness (Fragments)
^^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Concept                                     |Value                                      |
+============================================+===========================================+
|Unique Fragments                            |42236920                                   |
+--------------------------------------------+-------------------------------------------+
|Average Unique                              |23.05 %                                    |
+--------------------------------------------+-------------------------------------------+

Mapping Stats (Bases)
^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Bases                                 |%                                           |P1 Bases                                    |%                                           |P2 Bases                                    |%                                          |
+============================================+============================================+============================================+============================================+============================================+============================================+===========================================+
|Base Counts Overall A                       |10066424991                                 |38.45 %                                     |3740565199                                  |29.26 %                                     |6325859792                                  |47.21 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall C                       |2983438943                                  |11.39 %                                     |167265359                                   |1.31 %                                      |2816173584                                  |21.02 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall G                       |2863426485                                  |10.94 %                                     |2716752779                                  |21.25 %                                     |146673706                                   |1.09 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall T                       |9884884585                                  |37.75 %                                     |5975910753                                  |46.74 %                                     |3908973832                                  |29.17 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall N                       |385221995                                   |1.47 %                                      |184515732                                   |1.44 %                                      |200706263                                   |1.50 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+

Bisulfite Conversion Rate
^^^^^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Bisulfite Conversion Type                   |Conversion Rate                            |
+============================================+===========================================+
|Under Conversion Rate                       |0.06692108741154815                        |
+--------------------------------------------+-------------------------------------------+
|Over Conversion Rate                        |NA                                         |
+--------------------------------------------+-------------------------------------------+

Correct Pairs
^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Reads                                |
+============================================+===========================================+
|Correct Pairs                               |69718515                                   |
+--------------------------------------------+-------------------------------------------+

Mapping Quality Histogram
^^^^^^^^^^^^^^^^^^^^^^^^^

.. image:: 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612554.51_mapq.png

Read Length
^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Read Length                                 |Reads                                      |
+============================================+===========================================+
|78                                          |2151496                                    |
+--------------------------------------------+-------------------------------------------+
|89                                          |2557831                                    |
+--------------------------------------------+-------------------------------------------+
|41                                          |2171728                                    |
+--------------------------------------------+-------------------------------------------+
|54                                          |3029442                                    |
+--------------------------------------------+-------------------------------------------+
|28                                          |396054                                     |
+--------------------------------------------+-------------------------------------------+
|65                                          |2689273                                    |
+--------------------------------------------+-------------------------------------------+
|31                                          |468836                                     |
+--------------------------------------------+-------------------------------------------+
|46                                          |2986141                                    |
+--------------------------------------------+-------------------------------------------+
|22                                          |299511                                     |
+--------------------------------------------+-------------------------------------------+
|82                                          |1744135                                    |
+--------------------------------------------+-------------------------------------------+
|56                                          |3009851                                    |
+--------------------------------------------+-------------------------------------------+
|98                                          |14888326                                   |
+--------------------------------------------+-------------------------------------------+
|87                                          |1682988                                    |
+--------------------------------------------+-------------------------------------------+
|67                                          |2652697                                    |
+--------------------------------------------+-------------------------------------------+
|69                                          |2500959                                    |
+--------------------------------------------+-------------------------------------------+
|48                                          |2983555                                    |
+--------------------------------------------+-------------------------------------------+
|68                                          |2533273                                    |
+--------------------------------------------+-------------------------------------------+
|71                                          |2328274                                    |
+--------------------------------------------+-------------------------------------------+
|52                                          |2999220                                    |
+--------------------------------------------+-------------------------------------------+
|84                                          |1435006                                    |
+--------------------------------------------+-------------------------------------------+
|32                                          |488242                                     |
+--------------------------------------------+-------------------------------------------+
|86                                          |1576739                                    |
+--------------------------------------------+-------------------------------------------+
|59                                          |2798053                                    |
+--------------------------------------------+-------------------------------------------+
|73                                          |2268427                                    |
+--------------------------------------------+-------------------------------------------+
|95                                          |2282912                                    |
+--------------------------------------------+-------------------------------------------+
|42                                          |2452306                                    |
+--------------------------------------------+-------------------------------------------+
|70                                          |2416086                                    |
+--------------------------------------------+-------------------------------------------+
|96                                          |3806277                                    |
+--------------------------------------------+-------------------------------------------+
|45                                          |2890141                                    |
+--------------------------------------------+-------------------------------------------+
|97                                          |13088814                                   |
+--------------------------------------------+-------------------------------------------+
|51                                          |2915864                                    |
+--------------------------------------------+-------------------------------------------+
|64                                          |2706777                                    |
+--------------------------------------------+-------------------------------------------+
|38                                          |1631172                                    |
+--------------------------------------------+-------------------------------------------+
|49                                          |2944261                                    |
+--------------------------------------------+-------------------------------------------+
|33                                          |572896                                     |
+--------------------------------------------+-------------------------------------------+
|40                                          |1951940                                    |
+--------------------------------------------+-------------------------------------------+
|43                                          |2621424                                    |
+--------------------------------------------+-------------------------------------------+
|30                                          |430748                                     |
+--------------------------------------------+-------------------------------------------+
|90                                          |5509470                                    |
+--------------------------------------------+-------------------------------------------+
|85                                          |1522852                                    |
+--------------------------------------------+-------------------------------------------+
|62                                          |2762630                                    |
+--------------------------------------------+-------------------------------------------+
|72                                          |2328778                                    |
+--------------------------------------------+-------------------------------------------+
|79                                          |2152743                                    |
+--------------------------------------------+-------------------------------------------+
|77                                          |2258964                                    |
+--------------------------------------------+-------------------------------------------+
|75                                          |2300254                                    |
+--------------------------------------------+-------------------------------------------+
|74                                          |2295421                                    |
+--------------------------------------------+-------------------------------------------+
|36                                          |1206768                                    |
+--------------------------------------------+-------------------------------------------+
|66                                          |2642936                                    |
+--------------------------------------------+-------------------------------------------+
|81                                          |1889935                                    |
+--------------------------------------------+-------------------------------------------+
|34                                          |755484                                     |
+--------------------------------------------+-------------------------------------------+
|23                                          |321441                                     |
+--------------------------------------------+-------------------------------------------+
|63                                          |2698974                                    |
+--------------------------------------------+-------------------------------------------+
|27                                          |386139                                     |
+--------------------------------------------+-------------------------------------------+
|47                                          |3057081                                    |
+--------------------------------------------+-------------------------------------------+
|83                                          |1391393                                    |
+--------------------------------------------+-------------------------------------------+
|26                                          |393832                                     |
+--------------------------------------------+-------------------------------------------+
|60                                          |2766416                                    |
+--------------------------------------------+-------------------------------------------+
|80                                          |2050552                                    |
+--------------------------------------------+-------------------------------------------+
|21                                          |326194                                     |
+--------------------------------------------+-------------------------------------------+
|93                                          |1682306                                    |
+--------------------------------------------+-------------------------------------------+
|39                                          |1799120                                    |
+--------------------------------------------+-------------------------------------------+
|29                                          |410318                                     |
+--------------------------------------------+-------------------------------------------+
|50                                          |2928868                                    |
+--------------------------------------------+-------------------------------------------+
|57                                          |2986209                                    |
+--------------------------------------------+-------------------------------------------+
|92                                          |411119                                     |
+--------------------------------------------+-------------------------------------------+
|37                                          |1447346                                    |
+--------------------------------------------+-------------------------------------------+
|24                                          |332134                                     |
+--------------------------------------------+-------------------------------------------+
|25                                          |352562                                     |
+--------------------------------------------+-------------------------------------------+
|53                                          |2970270                                    |
+--------------------------------------------+-------------------------------------------+
|20                                          |303071                                     |
+--------------------------------------------+-------------------------------------------+
|44                                          |2772744                                    |
+--------------------------------------------+-------------------------------------------+
|61                                          |2684833                                    |
+--------------------------------------------+-------------------------------------------+
|91                                          |3308054                                    |
+--------------------------------------------+-------------------------------------------+
|76                                          |2256037                                    |
+--------------------------------------------+-------------------------------------------+
|35                                          |966547                                     |
+--------------------------------------------+-------------------------------------------+
|55                                          |3054450                                    |
+--------------------------------------------+-------------------------------------------+
|94                                          |1357152                                    |
+--------------------------------------------+-------------------------------------------+
|88                                          |1988910                                    |
+--------------------------------------------+-------------------------------------------+
|58                                          |2877873                                    |
+--------------------------------------------+-------------------------------------------+
|78                                          |1983729                                    |
+--------------------------------------------+-------------------------------------------+
|89                                          |1511800                                    |
+--------------------------------------------+-------------------------------------------+
|41                                          |2002238                                    |
+--------------------------------------------+-------------------------------------------+
|54                                          |2851561                                    |
+--------------------------------------------+-------------------------------------------+
|28                                          |222601                                     |
+--------------------------------------------+-------------------------------------------+
|65                                          |2514465                                    |
+--------------------------------------------+-------------------------------------------+
|31                                          |275041                                     |
+--------------------------------------------+-------------------------------------------+
|46                                          |2811989                                    |
+--------------------------------------------+-------------------------------------------+
|22                                          |102939                                     |
+--------------------------------------------+-------------------------------------------+
|82                                          |1728463                                    |
+--------------------------------------------+-------------------------------------------+
|56                                          |2829821                                    |
+--------------------------------------------+-------------------------------------------+
|98                                          |10515805                                   |
+--------------------------------------------+-------------------------------------------+
|87                                          |1590643                                    |
+--------------------------------------------+-------------------------------------------+
|67                                          |2471922                                    |
+--------------------------------------------+-------------------------------------------+
|69                                          |2322413                                    |
+--------------------------------------------+-------------------------------------------+
|48                                          |2807892                                    |
+--------------------------------------------+-------------------------------------------+
|68                                          |2350306                                    |
+--------------------------------------------+-------------------------------------------+
|71                                          |2130139                                    |
+--------------------------------------------+-------------------------------------------+
|52                                          |2816633                                    |
+--------------------------------------------+-------------------------------------------+
|84                                          |1607228                                    |
+--------------------------------------------+-------------------------------------------+
|32                                          |318668                                     |
+--------------------------------------------+-------------------------------------------+
|86                                          |1582772                                    |
+--------------------------------------------+-------------------------------------------+
|59                                          |2613884                                    |
+--------------------------------------------+-------------------------------------------+
|73                                          |2078635                                    |
+--------------------------------------------+-------------------------------------------+
|95                                          |2520957                                    |
+--------------------------------------------+-------------------------------------------+
|42                                          |2271924                                    |
+--------------------------------------------+-------------------------------------------+
|70                                          |2234285                                    |
+--------------------------------------------+-------------------------------------------+
|96                                          |4514452                                    |
+--------------------------------------------+-------------------------------------------+
|45                                          |2724701                                    |
+--------------------------------------------+-------------------------------------------+
|97                                          |4534613                                    |
+--------------------------------------------+-------------------------------------------+
|51                                          |2729951                                    |
+--------------------------------------------+-------------------------------------------+
|64                                          |2527764                                    |
+--------------------------------------------+-------------------------------------------+
|38                                          |1479231                                    |
+--------------------------------------------+-------------------------------------------+
|49                                          |2754841                                    |
+--------------------------------------------+-------------------------------------------+
|33                                          |392844                                     |
+--------------------------------------------+-------------------------------------------+
|40                                          |1788288                                    |
+--------------------------------------------+-------------------------------------------+
|43                                          |2448522                                    |
+--------------------------------------------+-------------------------------------------+
|30                                          |258206                                     |
+--------------------------------------------+-------------------------------------------+
|90                                          |1522296                                    |
+--------------------------------------------+-------------------------------------------+
|85                                          |1610680                                    |
+--------------------------------------------+-------------------------------------------+
|62                                          |2573745                                    |
+--------------------------------------------+-------------------------------------------+
|72                                          |2142226                                    |
+--------------------------------------------+-------------------------------------------+
|79                                          |1930764                                    |
+--------------------------------------------+-------------------------------------------+
|77                                          |2079324                                    |
+--------------------------------------------+-------------------------------------------+
|75                                          |2118312                                    |
+--------------------------------------------+-------------------------------------------+
|74                                          |2111093                                    |
+--------------------------------------------+-------------------------------------------+
|36                                          |1069748                                    |
+--------------------------------------------+-------------------------------------------+
|66                                          |2462871                                    |
+--------------------------------------------+-------------------------------------------+
|81                                          |1751519                                    |
+--------------------------------------------+-------------------------------------------+
|34                                          |587358                                     |
+--------------------------------------------+-------------------------------------------+
|23                                          |111823                                     |
+--------------------------------------------+-------------------------------------------+
|63                                          |2512387                                    |
+--------------------------------------------+-------------------------------------------+
|27                                          |201241                                     |
+--------------------------------------------+-------------------------------------------+
|47                                          |2887056                                    |
+--------------------------------------------+-------------------------------------------+
|83                                          |1606612                                    |
+--------------------------------------------+-------------------------------------------+
|26                                          |183913                                     |
+--------------------------------------------+-------------------------------------------+
|60                                          |2603477                                    |
+--------------------------------------------+-------------------------------------------+
|80                                          |1826966                                    |
+--------------------------------------------+-------------------------------------------+
|21                                          |96666                                      |
+--------------------------------------------+-------------------------------------------+
|93                                          |1516849                                    |
+--------------------------------------------+-------------------------------------------+
|39                                          |1664519                                    |
+--------------------------------------------+-------------------------------------------+
|29                                          |235648                                     |
+--------------------------------------------+-------------------------------------------+
|50                                          |2736375                                    |
+--------------------------------------------+-------------------------------------------+
|57                                          |2802659                                    |
+--------------------------------------------+-------------------------------------------+
|92                                          |1416862                                    |
+--------------------------------------------+-------------------------------------------+
|37                                          |1287690                                    |
+--------------------------------------------+-------------------------------------------+
|99                                          |28973747                                   |
+--------------------------------------------+-------------------------------------------+
|24                                          |133494                                     |
+--------------------------------------------+-------------------------------------------+
|25                                          |158122                                     |
+--------------------------------------------+-------------------------------------------+
|53                                          |2789932                                    |
+--------------------------------------------+-------------------------------------------+
|20                                          |95994                                      |
+--------------------------------------------+-------------------------------------------+
|44                                          |2594308                                    |
+--------------------------------------------+-------------------------------------------+
|61                                          |2536669                                    |
+--------------------------------------------+-------------------------------------------+
|91                                          |1451662                                    |
+--------------------------------------------+-------------------------------------------+
|76                                          |2071810                                    |
+--------------------------------------------+-------------------------------------------+
|35                                          |808754                                     |
+--------------------------------------------+-------------------------------------------+
|55                                          |2874110                                    |
+--------------------------------------------+-------------------------------------------+
|94                                          |1663824                                    |
+--------------------------------------------+-------------------------------------------+
|88                                          |1534607                                    |
+--------------------------------------------+-------------------------------------------+
|58                                          |2699977                                    |
+--------------------------------------------+-------------------------------------------+

Insert Size Histogram
^^^^^^^^^^^^^^^^^^^^^

.. image:: 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612554.51_isize.png

Sample K009037_K009038_K009039_K009040_K009041_K009042_5_lane_gembs Lane 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612556.51
---------------------------------------------------------------------------------------------------------------------------------

Mapping Stats (Reads)
^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Reads                                 |%                                           |P1 Reads                                    |%                                           |P2 Reads                                    |%                                          |
+============================================+============================================+============================================+============================================+============================================+============================================+===========================================+
|Sequenced Reads                             |269810928                                   |100.00 %                                    |134905464                                   |100.00 %                                    |134905464                                   |100.00 %                                   |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|General Reads                               |264356639                                   |97.98 %                                     |133408524                                   |98.89 %                                     |130948115                                   |97.07 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads in Control sequences                  |0                                           |0.00 %                                      |0                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads under conversion control              |15                                          |0.00 %                                      |7                                           |0.00 %                                      |8                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Reads over conversion control               |0                                           |0.00 %                                      |0                                           |0.00 %                                      |0                                           |0.00 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Unmapped reads                              |5454274                                     |2.02 %                                      |1496933                                     |1.11 %                                      |3957341                                     |2.93 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Bisulfite_reads C2T                         |140980059                                   |52.25 %                                     |71109119                                    |52.71 %                                     |69870940                                    |51.79 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Bisulfite_reads G2A                         |123376595                                   |45.73 %                                     |62299412                                    |46.18 %                                     |61077183                                    |45.27 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+

Uniqueness (Fragments)
^^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Concept                                     |Value                                      |
+============================================+===========================================+
|Unique Fragments                            |77378241                                   |
+--------------------------------------------+-------------------------------------------+
|Average Unique                              |57.36 %                                    |
+--------------------------------------------+-------------------------------------------+

Mapping Stats (Bases)
^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Bases                                 |%                                           |P1 Bases                                    |%                                           |P2 Bases                                    |%                                          |
+============================================+============================================+============================================+============================================+============================================+============================================+===========================================+
|Base Counts Overall A                       |5142935328                                  |38.31 %                                     |1886003405                                  |28.96 %                                     |3256931923                                  |47.11 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall C                       |1537728320                                  |11.45 %                                     |64128024                                    |0.98 %                                      |1473600296                                  |21.32 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall G                       |1457395348                                  |10.85 %                                     |1401017462                                  |21.51 %                                     |56377886                                    |0.82 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall T                       |5017954891                                  |37.37 %                                     |3026836132                                  |46.47 %                                     |1991118759                                  |28.80 %                                    |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+
|Base Counts Overall N                       |270099974                                   |2.01 %                                      |134966546                                   |2.07 %                                      |135133428                                   |1.95 %                                     |
+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+--------------------------------------------+-------------------------------------------+

Bisulfite Conversion Rate
^^^^^^^^^^^^^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Bisulfite Conversion Type                   |Conversion Rate                            |
+============================================+===========================================+
|Under Conversion Rate                       |NA                                         |
+--------------------------------------------+-------------------------------------------+
|Over Conversion Rate                        |NA                                         |
+--------------------------------------------+-------------------------------------------+

Correct Pairs
^^^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Concept                                     |Total Reads                                |
+============================================+===========================================+
|Correct Pairs                               |107178751                                  |
+--------------------------------------------+-------------------------------------------+

Mapping Quality Histogram
^^^^^^^^^^^^^^^^^^^^^^^^^

.. image:: 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612556.51_mapq.png

Read Length
^^^^^^^^^^^

+--------------------------------------------+-------------------------------------------+
|Read Length                                 |Reads                                      |
+============================================+===========================================+
|44                                          |11654251                                   |
+--------------------------------------------+-------------------------------------------+
|37                                          |1005163                                    |
+--------------------------------------------+-------------------------------------------+
|41                                          |2111063                                    |
+--------------------------------------------+-------------------------------------------+
|28                                          |511497                                     |
+--------------------------------------------+-------------------------------------------+
|31                                          |586804                                     |
+--------------------------------------------+-------------------------------------------+
|36                                          |935181                                     |
+--------------------------------------------+-------------------------------------------+
|46                                          |859192                                     |
+--------------------------------------------+-------------------------------------------+
|45                                          |6866703                                    |
+--------------------------------------------+-------------------------------------------+
|34                                          |832432                                     |
+--------------------------------------------+-------------------------------------------+
|23                                          |475234                                     |
+--------------------------------------------+-------------------------------------------+
|48                                          |2957793                                    |
+--------------------------------------------+-------------------------------------------+
|27                                          |510213                                     |
+--------------------------------------------+-------------------------------------------+
|47                                          |3391213                                    |
+--------------------------------------------+-------------------------------------------+
|49                                          |4851119                                    |
+--------------------------------------------+-------------------------------------------+
|52                                          |37951141                                   |
+--------------------------------------------+-------------------------------------------+
|30                                          |536700                                     |
+--------------------------------------------+-------------------------------------------+
|29                                          |527091                                     |
+--------------------------------------------+-------------------------------------------+
|21                                          |485273                                     |
+--------------------------------------------+-------------------------------------------+
|20                                          |447642                                     |
+--------------------------------------------+-------------------------------------------+
|39                                          |1443515                                    |
+--------------------------------------------+-------------------------------------------+
|50                                          |8459544                                    |
+--------------------------------------------+-------------------------------------------+
|42                                          |3121010                                    |
+--------------------------------------------+-------------------------------------------+
|25                                          |489116                                     |
+--------------------------------------------+-------------------------------------------+
|22                                          |437544                                     |
+--------------------------------------------+-------------------------------------------+
|24                                          |475923                                     |
+--------------------------------------------+-------------------------------------------+
|26                                          |531041                                     |
+--------------------------------------------+-------------------------------------------+
|51                                          |32478895                                   |
+--------------------------------------------+-------------------------------------------+
|38                                          |1224518                                    |
+--------------------------------------------+-------------------------------------------+
|32                                          |584141                                     |
+--------------------------------------------+-------------------------------------------+
|33                                          |707391                                     |
+--------------------------------------------+-------------------------------------------+
|40                                          |1746115                                    |
+--------------------------------------------+-------------------------------------------+
|43                                          |4823126                                    |
+--------------------------------------------+-------------------------------------------+
|35                                          |887880                                     |
+--------------------------------------------+-------------------------------------------+
|44                                          |2163054                                    |
+--------------------------------------------+-------------------------------------------+
|37                                          |984484                                     |
+--------------------------------------------+-------------------------------------------+
|41                                          |1540022                                    |
+--------------------------------------------+-------------------------------------------+
|28                                          |159857                                     |
+--------------------------------------------+-------------------------------------------+
|31                                          |200019                                     |
+--------------------------------------------+-------------------------------------------+
|36                                          |820653                                     |
+--------------------------------------------+-------------------------------------------+
|46                                          |2208619                                    |
+--------------------------------------------+-------------------------------------------+
|45                                          |2207998                                    |
+--------------------------------------------+-------------------------------------------+
|34                                          |452789                                     |
+--------------------------------------------+-------------------------------------------+
|23                                          |74919                                      |
+--------------------------------------------+-------------------------------------------+
|48                                          |2684889                                    |
+--------------------------------------------+-------------------------------------------+
|27                                          |144182                                     |
+--------------------------------------------+-------------------------------------------+
|47                                          |2445777                                    |
+--------------------------------------------+-------------------------------------------+
|49                                          |4387824                                    |
+--------------------------------------------+-------------------------------------------+
|52                                          |21616755                                   |
+--------------------------------------------+-------------------------------------------+
|30                                          |185990                                     |
+--------------------------------------------+-------------------------------------------+
|29                                          |169343                                     |
+--------------------------------------------+-------------------------------------------+
|21                                          |63720                                      |
+--------------------------------------------+-------------------------------------------+
|20                                          |63027                                      |
+--------------------------------------------+-------------------------------------------+
|39                                          |1247104                                    |
+--------------------------------------------+-------------------------------------------+
|50                                          |8907447                                    |
+--------------------------------------------+-------------------------------------------+
|42                                          |1765019                                    |
+--------------------------------------------+-------------------------------------------+
|25                                          |110238                                     |
+--------------------------------------------+-------------------------------------------+
|22                                          |67941                                      |
+--------------------------------------------+-------------------------------------------+
|24                                          |90556                                      |
+--------------------------------------------+-------------------------------------------+
|26                                          |130368                                     |
+--------------------------------------------+-------------------------------------------+
|53                                          |66029304                                   |
+--------------------------------------------+-------------------------------------------+
|51                                          |8365316                                    |
+--------------------------------------------+-------------------------------------------+
|38                                          |1124048                                    |
+--------------------------------------------+-------------------------------------------+
|32                                          |237802                                     |
+--------------------------------------------+-------------------------------------------+
|33                                          |296682                                     |
+--------------------------------------------+-------------------------------------------+
|40                                          |1374338                                    |
+--------------------------------------------+-------------------------------------------+
|43                                          |1953043                                    |
+--------------------------------------------+-------------------------------------------+
|35                                          |632337                                     |
+--------------------------------------------+-------------------------------------------+

Insert Size Histogram
^^^^^^^^^^^^^^^^^^^^^

.. image:: 51_Hf10.Bisulfite-Seq.DNA_methylation.EGAX00001612556.51_isize.png

