{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 169404614, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 159141245, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.94, 
            "paired": 169404614, 
            "paired_qc_failed": 0, 
            "read1": 84702307, 
            "read1_qc_failed": 0, 
            "read2": 84702307, 
            "read2_qc_failed": 0, 
            "paired_properly": 153935992, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 90.87, 
            "with_itself": 156059628, 
            "with_itself_qc_failed": 0, 
            "singletons": 3081617, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.82, 
            "diff_chroms": 1524309, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 297361170, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 291047932, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.88, 
            "paired": 297361170, 
            "paired_qc_failed": 0, 
            "read1": 148680585, 
            "read1_qc_failed": 0, 
            "read2": 148680585, 
            "read2_qc_failed": 0, 
            "paired_properly": 280334875, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.27, 
            "with_itself": 288800610, 
            "with_itself_qc_failed": 0, 
            "singletons": 2247322, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.76, 
            "diff_chroms": 6137618, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 68060174, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 7642662, 
            "paired_opt_dupes": 19793, 
            "dupes_pct": 0.112293
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 117478324, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 8499398, 
            "paired_opt_dupes": 27800, 
            "dupes_pct": 0.072349
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 68058180, 
            "distinct_read_pairs": 60415731, 
            "one_read_pair": 53508809, 
            "two_read_pair": 6235052, 
            "NRF": 0.887707, 
            "PBC1": 0.885677, 
            "PBC2": 8.581935
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 117374697, 
            "distinct_read_pairs": 108884086, 
            "one_read_pair": 100890040, 
            "two_read_pair": 7526259, 
            "NRF": 0.927662, 
            "PBC1": 0.926582, 
            "PBC2": 13.405071
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 120835024, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 120835024, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 120835024, 
            "paired_qc_failed": 0, 
            "read1": 60417512, 
            "read1_qc_failed": 0, 
            "read2": 60417512, 
            "read2_qc_failed": 0, 
            "paired_properly": 120835024, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 120835024, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 217957852, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 217957852, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 217957852, 
            "paired_qc_failed": 0, 
            "read1": 108978926, 
            "read1_qc_failed": 0, 
            "read2": 108978926, 
            "read2_qc_failed": 0, 
            "paired_properly": 217957852, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 217957852, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 130902, 
        "Np": 0, 
        "N_opt": 130902, 
        "N_consv": 130902, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 235, 
            "corr_est_frag_len": 0.223249495764514, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2203808, 
            "argmin_corr": 1500, 
            "min_corr": 0.1958926, 
            "NSC": 1.139652, 
            "RSC": 1.117145
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.753207902094
        }, 
        "rep1-pr1": {
            "FRiP": 0.738810811727
        }, 
        "rep1-pr2": {
            "FRiP": 0.738779801221
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.74002438206
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0947014506889, 
            "auc": 0.495463264164, 
            "ch_div": 0.168136356276, 
            "elbow_pt": 0.0, 
            "jsd": 0.85253458985, 
            "syn_auc": 0.501236002025, 
            "syn_elbow_pt": 0.55299132025, 
            "syn_jsd": 0.617199447059
        }
    ]
}