{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 124395348, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 120907606, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.2, 
            "paired": 124395348, 
            "paired_qc_failed": 0, 
            "read1": 62197674, 
            "read1_qc_failed": 0, 
            "read2": 62197674, 
            "read2_qc_failed": 0, 
            "paired_properly": 118092217, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.93, 
            "with_itself": 119855642, 
            "with_itself_qc_failed": 0, 
            "singletons": 1051964, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.85, 
            "diff_chroms": 857170, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 219992592, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 213659622, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.12, 
            "paired": 219992592, 
            "paired_qc_failed": 0, 
            "read1": 109996296, 
            "read1_qc_failed": 0, 
            "read2": 109996296, 
            "read2_qc_failed": 0, 
            "paired_properly": 197087249, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 89.59, 
            "with_itself": 211480826, 
            "with_itself_qc_failed": 0, 
            "singletons": 2178796, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.99, 
            "diff_chroms": 10437284, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 49062125, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 15439813, 
            "paired_opt_dupes": 10909, 
            "dupes_pct": 0.314699
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 82195568, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 8102886, 
            "paired_opt_dupes": 12260, 
            "dupes_pct": 0.098581
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 49059040, 
            "distinct_read_pairs": 33620072, 
            "one_read_pair": 22572478, 
            "two_read_pair": 7767302, 
            "NRF": 0.685298, 
            "PBC1": 0.671399, 
            "PBC2": 2.90609
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 82007813, 
            "distinct_read_pairs": 73933688, 
            "one_read_pair": 66591320, 
            "two_read_pair": 6676828, 
            "NRF": 0.901544, 
            "PBC1": 0.90069, 
            "PBC2": 9.973496
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 67244624, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 67244624, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 67244624, 
            "paired_qc_failed": 0, 
            "read1": 33622312, 
            "read1_qc_failed": 0, 
            "read2": 33622312, 
            "read2_qc_failed": 0, 
            "paired_properly": 67244624, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 67244624, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 148185364, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 148185364, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 148185364, 
            "paired_qc_failed": 0, 
            "read1": 74092682, 
            "read1_qc_failed": 0, 
            "read2": 74092682, 
            "read2_qc_failed": 0, 
            "paired_properly": 148185364, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 148185364, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 167891, 
        "Np": 0, 
        "N_opt": 167891, 
        "N_consv": 167891, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.167064507294555, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1695606, 
            "argmin_corr": 1500, 
            "min_corr": 0.161836, 
            "NSC": 1.032308, 
            "RSC": 0.6768646
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.3392742288
        }, 
        "rep1-pr1": {
            "FRiP": 0.310449186426
        }, 
        "rep1-pr2": {
            "FRiP": 0.30960165701
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.271440614404
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.236114321855, 
            "auc": 0.493920550277, 
            "ch_div": 0.122089361864, 
            "elbow_pt": 5.74916008259e-232, 
            "jsd": 0.679044604961, 
            "syn_auc": 0.498709528104, 
            "syn_elbow_pt": 0.228677354559, 
            "syn_jsd": 0.340670213761
        }
    ]
}