/EXTERNAL DEEP/K009046_K009047_K009048_3_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1039040250 | 100.00 % | 519520125 | 100.00 % | 519520125 | 100.00 % |
| General Reads | 1017330962 | 97.91 % | 513175091 | 98.78 % | 504155871 | 97.04 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1586931 | 0.15 % | 801335 | 0.15 % | 785596 | 0.15 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 20122357 | 1.94 % | 5543699 | 1.07 % | 14578658 | 2.81 % |
| Bisulfite_reads C2T | 522341213 | 50.27 % | 263424846 | 50.71 % | 258916367 | 49.84 % |
| Bisulfite_reads G2A | 496576680 | 47.79 % | 250551580 | 48.23 % | 246025100 | 47.36 % |
| Concept | Value |
|---|---|
| Unique Fragments | 401170508 |
| Average Unique | 77.22 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 40590738359 | 38.30 % | 17194250038 | 32.45 % | 23396488321 | 44.15 % |
| Base Counts Overall C | 11646373062 | 10.99 % | 762297163 | 1.44 % | 10884075899 | 20.54 % |
| Base Counts Overall G | 11987695632 | 11.31 % | 11182046151 | 21.10 % | 805649481 | 1.52 % |
| Base Counts Overall T | 40134927127 | 37.87 % | 23331125631 | 44.03 % | 16803801496 | 31.71 % |
| Base Counts Overall N | 1622371320 | 1.53 % | 521333767 | 0.98 % | 1101037553 | 2.08 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9956968664676635 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 459002267 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
 |
| LANE REPORTS |
|---|
| 52_Hm1a.Bisulfite-Seq.DNA_methylation.EGAX00001612361.52 |
| 52_Hm1a.Bisulfite-Seq.DNA_methylation.EGAX00001612169.52 |
| 52_Hm1a.Bisulfite-Seq.DNA_methylation.EGAX00001612332.52 |