{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 172582932, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 169616827, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.28, 
            "paired": 172582932, 
            "paired_qc_failed": 0, 
            "read1": 86291466, 
            "read1_qc_failed": 0, 
            "read2": 86291466, 
            "read2_qc_failed": 0, 
            "paired_properly": 168718273, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.76, 
            "with_itself": 169124518, 
            "with_itself_qc_failed": 0, 
            "singletons": 492309, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.29, 
            "diff_chroms": 102897, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 186874232, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 183817074, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.36, 
            "paired": 186874232, 
            "paired_qc_failed": 0, 
            "read1": 93437116, 
            "read1_qc_failed": 0, 
            "read2": 93437116, 
            "read2_qc_failed": 0, 
            "paired_properly": 181190078, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.96, 
            "with_itself": 182989360, 
            "with_itself_qc_failed": 0, 
            "singletons": 827714, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.44, 
            "diff_chroms": 1011019, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 78002803, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 16290193, 
            "paired_opt_dupes": 35307, 
            "dupes_pct": 0.208841
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 79420006, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3323828, 
            "paired_opt_dupes": 42686, 
            "dupes_pct": 0.041851
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 78001290, 
            "distinct_read_pairs": 61711385, 
            "one_read_pair": 48293561, 
            "two_read_pair": 10989895, 
            "NRF": 0.791159, 
            "PBC1": 0.782571, 
            "PBC2": 4.394361
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 79383916, 
            "distinct_read_pairs": 76061755, 
            "one_read_pair": 72820637, 
            "two_read_pair": 3164810, 
            "NRF": 0.958151, 
            "PBC1": 0.957388, 
            "PBC2": 23.009481
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 123425220, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 123425220, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 123425220, 
            "paired_qc_failed": 0, 
            "read1": 61712610, 
            "read1_qc_failed": 0, 
            "read2": 61712610, 
            "read2_qc_failed": 0, 
            "paired_properly": 123425220, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 123425220, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 152192356, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 152192356, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 152192356, 
            "paired_qc_failed": 0, 
            "read1": 76096178, 
            "read1_qc_failed": 0, 
            "read2": 76096178, 
            "read2_qc_failed": 0, 
            "paired_properly": 152192356, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 152192356, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 133157, 
        "Np": 0, 
        "N_opt": 133157, 
        "N_consv": 133157, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.21470130901799, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2097831, 
            "argmin_corr": 1500, 
            "min_corr": 0.1873783, 
            "NSC": 1.145817, 
            "RSC": 1.219514
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.63817358876
        }, 
        "rep1-pr1": {
            "FRiP": 0.614119756041
        }, 
        "rep1-pr2": {
            "FRiP": 0.614207875914
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.606160026337
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.137508768582, 
            "auc": 0.496345150487, 
            "ch_div": 0.119449981108, 
            "elbow_pt": 0.0, 
            "jsd": 0.802725304428, 
            "syn_auc": 0.50577631103, 
            "syn_elbow_pt": 0.450124046984, 
            "syn_jsd": 0.535661784337
        }
    ]
}
