/REMC/A27342_5_lane_gembs/C1T1JACXX_6_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 346077922 | 100.00 % | 173038961 | 100.00 % | 173038961 | 100.00 % |
| General Reads | 318791806 | 92.12 % | 158854308 | 91.80 % | 159937498 | 92.43 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1448385 | 0.42 % | 727116 | 0.42 % | 721269 | 0.42 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 25837731 | 7.47 % | 13457537 | 7.78 % | 12380194 | 7.15 % |
| Bisulfite_reads C2T | 162350256 | 46.91 % | 80924933 | 46.77 % | 81425323 | 47.06 % |
| Bisulfite_reads G2A | 157889935 | 45.62 % | 78656491 | 45.46 % | 79233444 | 45.79 % |
| Concept | Value |
|---|---|
| Unique Fragments | 84008329 |
| Average Unique | 48.55 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 13357512277 | 38.21 % | 5239304182 | 29.98 % | 8118208095 | 46.45 % |
| Base Counts Overall C | 3899664798 | 11.16 % | 513926077 | 2.94 % | 3385738721 | 19.37 % |
| Base Counts Overall G | 4632423373 | 13.25 % | 3796867062 | 21.73 % | 835556311 | 4.78 % |
| Base Counts Overall T | 12694604692 | 36.32 % | 7730419524 | 44.23 % | 4964185168 | 28.40 % |
| Base Counts Overall N | 369664982 | 1.06 % | 196418216 | 1.12 % | 173246766 | 0.99 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9712323058090786 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 104652408 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 173038961 |
| 100 | 173038961 |
| Insert Size Histogram |
|---|
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