/CEMT/A75621_1_lane_gembs

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SAMPLE A75621_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1017610582 100.00 % 508805291 100.00 % 508805291 100.00 %
General Reads 1001031172 98.37 % 503693556 99.00 % 497337616 97.75 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 4696239 0.46 % 2360179 0.46 % 2336060 0.46 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 11883171 1.17 % 2751556 0.54 % 9131615 1.79 %
Bisulfite_reads C2T 514494923 50.56 % 258719004 50.85 % 255775919 50.27 %
Bisulfite_reads G2A 491232488 48.27 % 247334731 48.61 % 243897757 47.94 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 440301635
Average Unique 86.54 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 59643190610 38.82 % 24940662462 32.46 % 34702528148 45.17 %
Base Counts Overall C 16307766888 10.61 % 578440103 0.75 % 15729326785 20.47 %
Base Counts Overall G 16157641025 10.52 % 15384536348 20.02 % 773104677 1.01 %
Base Counts Overall T 60517828488 39.38 % 35409514983 46.09 % 25108313505 32.68 %
Base Counts Overall N 1032770871 0.67 % 516445045 0.67 % 516325826 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9942241496360024
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 486762637



Mapping Quality

Mapping Quality Histogram
A75621_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A75621_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HKNMNALXX_5_2