/CEMT/A75621_1_lane_gembs/HKNMNALXX_5_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1017610582 | 100.00 % | 508805291 | 100.00 % | 508805291 | 100.00 % |
| General Reads | 1001031172 | 98.37 % | 503693556 | 99.00 % | 497337616 | 97.75 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4696239 | 0.46 % | 2360179 | 0.46 % | 2336060 | 0.46 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 11883171 | 1.17 % | 2751556 | 0.54 % | 9131615 | 1.79 % |
| Bisulfite_reads C2T | 514494923 | 50.56 % | 258719004 | 50.85 % | 255775919 | 50.27 % |
| Bisulfite_reads G2A | 491232488 | 48.27 % | 247334731 | 48.61 % | 243897757 | 47.94 % |
| Concept | Value |
|---|---|
| Unique Fragments | 440301635 |
| Average Unique | 86.54 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 59643190610 | 38.82 % | 24940662462 | 32.46 % | 34702528148 | 45.17 % |
| Base Counts Overall C | 16307766888 | 10.61 % | 578440103 | 0.75 % | 15729326785 | 20.47 % |
| Base Counts Overall G | 16157641025 | 10.52 % | 15384536348 | 20.02 % | 773104677 | 1.01 % |
| Base Counts Overall T | 60517828488 | 39.38 % | 35409514983 | 46.09 % | 25108313505 | 32.68 % |
| Base Counts Overall N | 1032770871 | 0.67 % | 516445045 | 0.67 % | 516325826 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9942241496360024 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 486762637 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 508805291 |
| 150 | 508805291 |
| Insert Size Histogram |
|---|
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