{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 138483682, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 136482720, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.56, 
            "paired": 138483682, 
            "paired_qc_failed": 0, 
            "read1": 69241841, 
            "read1_qc_failed": 0, 
            "read2": 69241841, 
            "read2_qc_failed": 0, 
            "paired_properly": 135337460, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.73, 
            "with_itself": 135603027, 
            "with_itself_qc_failed": 0, 
            "singletons": 879693, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.64, 
            "diff_chroms": 43313, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 191368600, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 188343604, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.42, 
            "paired": 191368600, 
            "paired_qc_failed": 0, 
            "read1": 95684300, 
            "read1_qc_failed": 0, 
            "read2": 95684300, 
            "read2_qc_failed": 0, 
            "paired_properly": 184873296, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.61, 
            "with_itself": 187197664, 
            "with_itself_qc_failed": 0, 
            "singletons": 1145940, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.6, 
            "diff_chroms": 115130, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 60075464, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3177483, 
            "paired_opt_dupes": 3486, 
            "dupes_pct": 0.052892
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 81954369, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 829023, 
            "paired_opt_dupes": 3469, 
            "dupes_pct": 0.010116
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 60041203, 
            "distinct_read_pairs": 56868467, 
            "one_read_pair": 53839938, 
            "two_read_pair": 2893932, 
            "NRF": 0.947157, 
            "PBC1": 0.946745, 
            "PBC2": 18.604424
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 81835994, 
            "distinct_read_pairs": 81045982, 
            "one_read_pair": 80287109, 
            "two_read_pair": 744300, 
            "NRF": 0.990346, 
            "PBC1": 0.990637, 
            "PBC2": 107.869285
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 113795962, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 113795962, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 113795962, 
            "paired_qc_failed": 0, 
            "read1": 56897981, 
            "read1_qc_failed": 0, 
            "read2": 56897981, 
            "read2_qc_failed": 0, 
            "paired_properly": 113795962, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 113795962, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 162250692, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 162250692, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 162250692, 
            "paired_qc_failed": 0, 
            "read1": 81125346, 
            "read1_qc_failed": 0, 
            "read2": 81125346, 
            "read2_qc_failed": 0, 
            "paired_properly": 162250692, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 162250692, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 157507, 
        "Np": 0, 
        "N_opt": 157507, 
        "N_consv": 157507, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -5, 
            "corr_est_frag_len": 0.180881522280579, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1814411, 
            "argmin_corr": 1500, 
            "min_corr": 0.1719519, 
            "NSC": 1.051931, 
            "RSC": 0.9410309
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.362826408476
        }, 
        "rep1-pr1": {
            "FRiP": 0.313061466681
        }, 
        "rep1-pr2": {
            "FRiP": 0.312997177979
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.288514207909
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.233348021731, 
            "auc": 0.496188529454, 
            "ch_div": 0.103368373912, 
            "elbow_pt": 0.0, 
            "jsd": 0.654825643466, 
            "syn_auc": 0.496503652342, 
            "syn_elbow_pt": 0.2019988654, 
            "syn_jsd": 0.358705484592
        }
    ]
}