{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 65109650, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 64403657, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.92, 
            "paired": 65109650, 
            "paired_qc_failed": 0, 
            "read1": 32554825, 
            "read1_qc_failed": 0, 
            "read2": 32554825, 
            "read2_qc_failed": 0, 
            "paired_properly": 63981738, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 98.27, 
            "with_itself": 64123767, 
            "with_itself_qc_failed": 0, 
            "singletons": 279890, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.43, 
            "diff_chroms": 21490, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 191368600, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 188343604, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.42, 
            "paired": 191368600, 
            "paired_qc_failed": 0, 
            "read1": 95684300, 
            "read1_qc_failed": 0, 
            "read2": 95684300, 
            "read2_qc_failed": 0, 
            "paired_properly": 184873296, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.61, 
            "with_itself": 187197664, 
            "with_itself_qc_failed": 0, 
            "singletons": 1145940, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.6, 
            "diff_chroms": 115130, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 28922260, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 804790, 
            "paired_opt_dupes": 2072, 
            "dupes_pct": 0.027826
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 81954369, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 829023, 
            "paired_opt_dupes": 3469, 
            "dupes_pct": 0.010116
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 28888946, 
            "distinct_read_pairs": 28087436, 
            "one_read_pair": 27340439, 
            "two_read_pair": 705747, 
            "NRF": 0.972255, 
            "PBC1": 0.973405, 
            "PBC2": 38.739717
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 81835994, 
            "distinct_read_pairs": 81045982, 
            "one_read_pair": 80287109, 
            "two_read_pair": 744300, 
            "NRF": 0.990346, 
            "PBC1": 0.990637, 
            "PBC2": 107.869285
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 56234940, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 56234940, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 56234940, 
            "paired_qc_failed": 0, 
            "read1": 28117470, 
            "read1_qc_failed": 0, 
            "read2": 28117470, 
            "read2_qc_failed": 0, 
            "paired_properly": 56234940, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 56234940, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 162250692, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 162250692, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 162250692, 
            "paired_qc_failed": 0, 
            "read1": 81125346, 
            "read1_qc_failed": 0, 
            "read2": 81125346, 
            "read2_qc_failed": 0, 
            "paired_properly": 162250692, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 162250692, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 57989, 
        "Np": 0, 
        "N_opt": 57989, 
        "N_consv": 57989, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 0, 
            "corr_est_frag_len": 0.237365775380158, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1896009, 
            "argmin_corr": 1500, 
            "min_corr": 0.1634927, 
            "NSC": 1.451843, 
            "RSC": 2.829502
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.45927766422
        }, 
        "rep1-pr1": {
            "FRiP": 0.454552491014
        }, 
        "rep1-pr2": {
            "FRiP": 0.454652678158
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.447788594872
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.174845295341, 
            "auc": 0.494582729045, 
            "ch_div": 0.125086468525, 
            "elbow_pt": 1.49558586462e-292, 
            "jsd": 0.8245678573, 
            "syn_auc": 0.502956667584, 
            "syn_elbow_pt": 0.395681863488, 
            "syn_jsd": 0.48495063992
        }
    ]
}