/CEMT/A91240_2_lane_gembs

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SAMPLE A91240_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1843909220 100.00 % 921954610 100.00 % 921954610 100.00 %
General Reads 1676609774 90.93 % 843133609 91.45 % 833476165 90.40 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 16447086 0.89 % 8260790 0.90 % 8186296 0.89 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 150852360 8.18 % 70560211 7.65 % 80292149 8.71 %
Bisulfite_reads C2T 866670963 47.00 % 435691637 47.26 % 430979326 46.75 %
Bisulfite_reads G2A 826385897 44.82 % 415702762 45.09 % 410683135 44.54 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 733152703
Average Unique 79.52 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 106152282552 38.13 % 43989570723 31.60 % 62162711829 44.65 %
Base Counts Overall C 31730727930 11.40 % 3417355162 2.45 % 28313372768 20.34 %
Base Counts Overall G 32022337092 11.50 % 28332005987 20.35 % 3690331105 2.65 %
Base Counts Overall T 106645386934 38.30 % 62539676220 44.92 % 44105710714 31.68 %
Base Counts Overall N 1879557712 0.68 % 936538018 0.67 % 943019694 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9928405426471443
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 818971038



Mapping Quality

Mapping Quality Histogram
A91240_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A91240_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HL2FWCCXY_1_2
HL2VKCCXY_3_2