/CEMT/A91240_2_lane_gembs/HL2FWCCXY_1_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1010470678 | 100.00 % | 505235339 | 100.00 % | 505235339 | 100.00 % |
| General Reads | 920283705 | 91.07 % | 462161232 | 91.47 % | 458122473 | 90.68 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 9058679 | 0.90 % | 4545007 | 0.90 % | 4513672 | 0.89 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 81128294 | 8.03 % | 38529100 | 7.63 % | 42599194 | 8.43 % |
| Bisulfite_reads C2T | 475898061 | 47.10 % | 238897814 | 47.28 % | 237000247 | 46.91 % |
| Bisulfite_reads G2A | 453444323 | 44.87 % | 227808425 | 45.09 % | 225635898 | 44.66 % |
| Concept | Value |
|---|---|
| Unique Fragments | 402862285 |
| Average Unique | 79.74 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 58100155668 | 38.08 % | 24052776822 | 31.53 % | 34047378846 | 44.63 % |
| Base Counts Overall C | 17489681776 | 11.46 % | 1893178112 | 2.48 % | 15596503664 | 20.44 % |
| Base Counts Overall G | 17573238900 | 11.52 % | 15558400722 | 20.39 % | 2014838178 | 2.64 % |
| Base Counts Overall T | 58387648261 | 38.27 % | 34271447139 | 44.92 % | 24116201122 | 31.61 % |
| Base Counts Overall N | 1030347773 | 0.68 % | 514733394 | 0.67 % | 515614379 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9933263950063416 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 450280306 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 505235339 |
| 150 | 505235339 |
| Insert Size Histogram |
|---|
 |