/CEMT/A91240_2_lane_gembs/HL2VKCCXY_3_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 833438542 | 100.00 % | 416719271 | 100.00 % | 416719271 | 100.00 % |
| General Reads | 756326069 | 90.75 % | 380972377 | 91.42 % | 375353692 | 90.07 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 7388407 | 0.89 % | 3715783 | 0.89 % | 3672624 | 0.88 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 69724066 | 8.37 % | 32031111 | 7.69 % | 37692955 | 9.05 % |
| Bisulfite_reads C2T | 390772902 | 46.89 % | 196793823 | 47.22 % | 193979079 | 46.55 % |
| Bisulfite_reads G2A | 372941574 | 44.75 % | 187894337 | 45.09 % | 185047237 | 44.41 % |
| Concept | Value |
|---|---|
| Unique Fragments | 330290418 |
| Average Unique | 79.26 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 48052126884 | 38.18 % | 19936793901 | 31.68 % | 28115332983 | 44.68 % |
| Base Counts Overall C | 14241046154 | 11.32 % | 1524177050 | 2.42 % | 12716869104 | 20.21 % |
| Base Counts Overall G | 14449098192 | 11.48 % | 12773605265 | 20.30 % | 1675492927 | 2.66 % |
| Base Counts Overall T | 48257738673 | 38.35 % | 28268229081 | 44.92 % | 19989509592 | 31.77 % |
| Base Counts Overall N | 849209939 | 0.67 % | 421804624 | 0.67 % | 427405315 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.992240835405022 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 368690732 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 416719271 |
| 150 | 416719271 |
| Insert Size Histogram |
|---|
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