{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 104998134, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 102645718, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.76, 
            "paired": 104998134, 
            "paired_qc_failed": 0, 
            "read1": 52499067, 
            "read1_qc_failed": 0, 
            "read2": 52499067, 
            "read2_qc_failed": 0, 
            "paired_properly": 101090649, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.28, 
            "with_itself": 102073195, 
            "with_itself_qc_failed": 0, 
            "singletons": 572523, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.55, 
            "diff_chroms": 43504, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 201652566, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 198032065, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.2, 
            "paired": 201652566, 
            "paired_qc_failed": 0, 
            "read1": 100826283, 
            "read1_qc_failed": 0, 
            "read2": 100826283, 
            "read2_qc_failed": 0, 
            "paired_properly": 194936556, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.67, 
            "with_itself": 196867125, 
            "with_itself_qc_failed": 0, 
            "singletons": 1164940, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.58, 
            "diff_chroms": 328067, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 46350168, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 7400327, 
            "paired_opt_dupes": 2850, 
            "dupes_pct": 0.159661
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 84633399, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1125235, 
            "paired_opt_dupes": 1306, 
            "dupes_pct": 0.013295
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 46335146, 
            "distinct_read_pairs": 38937193, 
            "one_read_pair": 32822353, 
            "two_read_pair": 5216141, 
            "NRF": 0.840338, 
            "PBC1": 0.842956, 
            "PBC2": 6.292459
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 84626173, 
            "distinct_read_pairs": 83501515, 
            "one_read_pair": 82459535, 
            "two_read_pair": 999176, 
            "NRF": 0.98671, 
            "PBC1": 0.987521, 
            "PBC2": 82.527538
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 77899682, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 77899682, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 77899682, 
            "paired_qc_failed": 0, 
            "read1": 38949841, 
            "read1_qc_failed": 0, 
            "read2": 38949841, 
            "read2_qc_failed": 0, 
            "paired_properly": 77899682, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 77899682, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 167016328, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 167016328, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 167016328, 
            "paired_qc_failed": 0, 
            "read1": 83508164, 
            "read1_qc_failed": 0, 
            "read2": 83508164, 
            "read2_qc_failed": 0, 
            "paired_properly": 167016328, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 167016328, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 51370, 
        "Np": 0, 
        "N_opt": 51370, 
        "N_consv": 51370, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.276904188610181, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.2100775, 
            "argmin_corr": 1500, 
            "min_corr": 0.1741944, 
            "NSC": 1.589627, 
            "RSC": 2.862342
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.430499975666
        }, 
        "rep1-pr1": {
            "FRiP": 0.430234395923
        }, 
        "rep1-pr2": {
            "FRiP": 0.430328775104
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.412905860322
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.181918946906, 
            "auc": 0.495399321274, 
            "ch_div": 0.115484651293, 
            "elbow_pt": 0.0, 
            "jsd": 0.816455253346, 
            "syn_auc": 0.496929212988, 
            "syn_elbow_pt": 0.397156655476, 
            "syn_jsd": 0.48630415494
        }
    ]
}