/CEMT/A83594_2_lane_gembs/HFJM5CCXY_4_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 952588494 | 100.00 % | 476294247 | 100.00 % | 476294247 | 100.00 % |
| General Reads | 834671530 | 87.62 % | 419584732 | 88.09 % | 415086798 | 87.15 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 244735 | 0.03 % | 122789 | 0.03 % | 121946 | 0.03 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 117672229 | 12.35 % | 56586726 | 11.88 % | 61085503 | 12.83 % |
| Bisulfite_reads C2T | 427370241 | 44.86 % | 214752151 | 45.09 % | 212618090 | 44.64 % |
| Bisulfite_reads G2A | 407546024 | 42.78 % | 204955370 | 43.03 % | 202590654 | 42.53 % |
| Concept | Value |
|---|---|
| Unique Fragments | 359113419 |
| Average Unique | 75.40 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 54077019545 | 37.60 % | 24154953970 | 33.59 % | 29922065575 | 41.60 % |
| Base Counts Overall C | 17182842359 | 11.95 % | 2419391807 | 3.36 % | 14763450552 | 20.53 % |
| Base Counts Overall G | 17285357145 | 12.02 % | 14718443246 | 20.46 % | 2566913899 | 3.57 % |
| Base Counts Overall T | 54323160794 | 37.77 % | 30143717386 | 41.91 % | 24179443408 | 33.62 % |
| Base Counts Overall N | 972482751 | 0.68 % | 483924888 | 0.67 % | 488557863 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.8702133790556316 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 401988885 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 476294247 |
| 150 | 476294247 |
| Insert Size Histogram |
|---|
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