/CEMT/A83594_2_lane_gembs/HGCV2CCXY_5_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 155119702 | 100.00 % | 77559851 | 100.00 % | 77559851 | 100.00 % |
| General Reads | 152890904 | 98.56 % | 77009033 | 99.29 % | 75881871 | 97.84 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 41106 | 0.03 % | 20648 | 0.03 % | 20458 | 0.03 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2187692 | 1.41 % | 530170 | 0.68 % | 1657522 | 2.14 % |
| Bisulfite_reads C2T | 78230203 | 50.43 % | 39385185 | 50.78 % | 38845018 | 50.08 % |
| Bisulfite_reads G2A | 74701807 | 48.16 % | 37644496 | 48.54 % | 37057311 | 47.78 % |
| Concept | Value |
|---|---|
| Unique Fragments | 65471952 |
| Average Unique | 84.41 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 9156008146 | 39.09 % | 4010449404 | 34.24 % | 5145558742 | 43.94 % |
| Base Counts Overall C | 2471329715 | 10.55 % | 110264756 | 0.94 % | 2361064959 | 20.16 % |
| Base Counts Overall G | 2488762428 | 10.63 % | 2361655876 | 20.17 % | 127106552 | 1.09 % |
| Base Counts Overall T | 9150149525 | 39.06 % | 5151203940 | 43.98 % | 3998945585 | 34.15 % |
| Base Counts Overall N | 156825188 | 0.67 % | 77963525 | 0.67 % | 78861663 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9942709671390411 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 73479892 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 77559851 |
| 150 | 77559851 |
| Insert Size Histogram |
|---|
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