{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 114787364, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 109740605, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.6, 
            "paired": 114787364, 
            "paired_qc_failed": 0, 
            "read1": 57393682, 
            "read1_qc_failed": 0, 
            "read2": 57393682, 
            "read2_qc_failed": 0, 
            "paired_properly": 103015044, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 89.74, 
            "with_itself": 108281513, 
            "with_itself_qc_failed": 0, 
            "singletons": 1459092, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.27, 
            "diff_chroms": 3168805, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 141252688, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 137128851, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.08, 
            "paired": 141252688, 
            "paired_qc_failed": 0, 
            "read1": 70626344, 
            "read1_qc_failed": 0, 
            "read2": 70626344, 
            "read2_qc_failed": 0, 
            "paired_properly": 120202392, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 85.1, 
            "with_itself": 135538631, 
            "with_itself_qc_failed": 0, 
            "singletons": 1590220, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.13, 
            "diff_chroms": 10787220, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 38950173, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 785935, 
            "paired_opt_dupes": 1285, 
            "dupes_pct": 0.020178
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 53575957, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 637468, 
            "paired_opt_dupes": 1319, 
            "dupes_pct": 0.011898
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 38943099, 
            "distinct_read_pairs": 38157520, 
            "one_read_pair": 37491636, 
            "two_read_pair": 634654, 
            "NRF": 0.979828, 
            "PBC1": 0.982549, 
            "PBC2": 59.074135
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 53569792, 
            "distinct_read_pairs": 52932780, 
            "one_read_pair": 52328435, 
            "two_read_pair": 584956, 
            "NRF": 0.988109, 
            "PBC1": 0.988583, 
            "PBC2": 89.457045
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 76328476, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 76328476, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 76328476, 
            "paired_qc_failed": 0, 
            "read1": 38164238, 
            "read1_qc_failed": 0, 
            "read2": 38164238, 
            "read2_qc_failed": 0, 
            "paired_properly": 76328476, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 76328476, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 105876978, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 105876978, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 105876978, 
            "paired_qc_failed": 0, 
            "read1": 52938489, 
            "read1_qc_failed": 0, 
            "read2": 52938489, 
            "read2_qc_failed": 0, 
            "paired_properly": 105876978, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 105876978, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 191591, 
        "Np": 0, 
        "N_opt": 191591, 
        "N_consv": 191591, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -10, 
            "corr_est_frag_len": 0.197273519949136, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2178756, 
            "argmin_corr": 1500, 
            "min_corr": 0.1831188, 
            "NSC": 1.077298, 
            "RSC": 0.40725
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.475242835488
        }, 
        "rep1-pr1": {
            "FRiP": 0.446580280899
        }, 
        "rep1-pr2": {
            "FRiP": 0.446940078915
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.408681512845
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.177976296407, 
            "auc": 0.495351818562, 
            "ch_div": 0.189707910994, 
            "elbow_pt": 0.0, 
            "jsd": 0.692812731162, 
            "syn_auc": 0.499683937403, 
            "syn_elbow_pt": 0.267603753568, 
            "syn_jsd": 0.422762729342
        }
    ]
}