{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 19809550, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 16126085, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 81.41, 
            "paired": 19809550, 
            "paired_qc_failed": 0, 
            "read1": 9904775, 
            "read1_qc_failed": 0, 
            "read2": 9904775, 
            "read2_qc_failed": 0, 
            "paired_properly": 15801473, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 79.77, 
            "with_itself": 16043570, 
            "with_itself_qc_failed": 0, 
            "singletons": 82515, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.42, 
            "diff_chroms": 92850, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 140350086, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 136223961, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.06, 
            "paired": 140350086, 
            "paired_qc_failed": 0, 
            "read1": 70175043, 
            "read1_qc_failed": 0, 
            "read2": 70175043, 
            "read2_qc_failed": 0, 
            "paired_properly": 120532551, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 85.88, 
            "with_itself": 134681268, 
            "with_itself_qc_failed": 0, 
            "singletons": 1542693, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.1, 
            "diff_chroms": 9773665, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 7302336, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 492243, 
            "paired_opt_dupes": 1664, 
            "dupes_pct": 0.067409
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 53789939, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 594512, 
            "paired_opt_dupes": 1824, 
            "dupes_pct": 0.011052
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 7301663, 
            "distinct_read_pairs": 6809459, 
            "one_read_pair": 6370917, 
            "two_read_pair": 404787, 
            "NRF": 0.93259, 
            "PBC1": 0.935598, 
            "PBC2": 15.738937
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 53785343, 
            "distinct_read_pairs": 53191094, 
            "one_read_pair": 52633239, 
            "two_read_pair": 539980, 
            "NRF": 0.988951, 
            "PBC1": 0.989512, 
            "PBC2": 97.472571
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 13620186, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 13620186, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 13620186, 
            "paired_qc_failed": 0, 
            "read1": 6810093, 
            "read1_qc_failed": 0, 
            "read2": 6810093, 
            "read2_qc_failed": 0, 
            "paired_properly": 13620186, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 13620186, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 106390854, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 106390854, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 106390854, 
            "paired_qc_failed": 0, 
            "read1": 53195427, 
            "read1_qc_failed": 0, 
            "read2": 53195427, 
            "read2_qc_failed": 0, 
            "paired_properly": 106390854, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 106390854, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 67249, 
        "Np": 0, 
        "N_opt": 67249, 
        "N_consv": 67249, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 8106382, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.189356974930971, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.1342772, 
            "argmin_corr": 1500, 
            "min_corr": 0.09669156, 
            "NSC": 1.958361, 
            "RSC": 2.465444
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.514163827112
        }, 
        "rep1-pr1": {
            "FRiP": 0.557029044888
        }, 
        "rep1-pr2": {
            "FRiP": 0.556846227703
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.456934684532
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0972558807318, 
            "auc": 0.488994456842, 
            "ch_div": 0.498360616408, 
            "elbow_pt": 6.50088299491e-70, 
            "jsd": 0.807570353547, 
            "syn_auc": 0.507755093025, 
            "syn_elbow_pt": 0.39691073178, 
            "syn_jsd": 0.484070334932
        }
    ]
}