{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 89772950, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 87419811, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.38, 
            "paired": 89772950, 
            "paired_qc_failed": 0, 
            "read1": 44886475, 
            "read1_qc_failed": 0, 
            "read2": 44886475, 
            "read2_qc_failed": 0, 
            "paired_properly": 80743439, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 89.94, 
            "with_itself": 86502796, 
            "with_itself_qc_failed": 0, 
            "singletons": 917015, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.02, 
            "diff_chroms": 4156922, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 140350086, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 136223961, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.06, 
            "paired": 140350086, 
            "paired_qc_failed": 0, 
            "read1": 70175043, 
            "read1_qc_failed": 0, 
            "read2": 70175043, 
            "read2_qc_failed": 0, 
            "paired_properly": 120532551, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 85.88, 
            "with_itself": 134681268, 
            "with_itself_qc_failed": 0, 
            "singletons": 1542693, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.1, 
            "diff_chroms": 9773665, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 35225014, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 363942, 
            "paired_opt_dupes": 1864, 
            "dupes_pct": 0.010332
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 53789939, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 594512, 
            "paired_opt_dupes": 1824, 
            "dupes_pct": 0.011052
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 35217181, 
            "distinct_read_pairs": 34853593, 
            "one_read_pair": 34512057, 
            "two_read_pair": 333207, 
            "NRF": 0.989676, 
            "PBC1": 0.990201, 
            "PBC2": 103.575426
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 53785343, 
            "distinct_read_pairs": 53191094, 
            "one_read_pair": 52633239, 
            "two_read_pair": 539980, 
            "NRF": 0.988951, 
            "PBC1": 0.989512, 
            "PBC2": 97.472571
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 69722144, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 69722144, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 69722144, 
            "paired_qc_failed": 0, 
            "read1": 34861072, 
            "read1_qc_failed": 0, 
            "read2": 34861072, 
            "read2_qc_failed": 0, 
            "paired_properly": 69722144, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 69722144, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 106390854, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 106390854, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 106390854, 
            "paired_qc_failed": 0, 
            "read1": 53195427, 
            "read1_qc_failed": 0, 
            "read2": 53195427, 
            "read2_qc_failed": 0, 
            "paired_properly": 106390854, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 106390854, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 152598, 
        "Np": 0, 
        "N_opt": 152598, 
        "N_consv": 152598, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -10, 
            "corr_est_frag_len": 0.181868143366042, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1884843, 
            "argmin_corr": 1500, 
            "min_corr": 0.1740761, 
            "NSC": 1.044762, 
            "RSC": 0.5408061
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.433900530714
        }, 
        "rep1-pr1": {
            "FRiP": 0.394955739715
        }, 
        "rep1-pr2": {
            "FRiP": 0.394862572558
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.371118882923
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.205329168805, 
            "auc": 0.495132503052, 
            "ch_div": 0.12641446816, 
            "elbow_pt": 0.0, 
            "jsd": 0.716392636369, 
            "syn_auc": 0.503033833445, 
            "syn_elbow_pt": 0.244994133595, 
            "syn_jsd": 0.395469462623
        }
    ]
}