{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 121791286, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 120343697, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.81, 
            "paired": 121791286, 
            "paired_qc_failed": 0, 
            "read1": 60895643, 
            "read1_qc_failed": 0, 
            "read2": 60895643, 
            "read2_qc_failed": 0, 
            "paired_properly": 113610913, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 93.28, 
            "with_itself": 119473118, 
            "with_itself_qc_failed": 0, 
            "singletons": 870579, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.71, 
            "diff_chroms": 5086319, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 151796868, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 148668398, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.94, 
            "paired": 151796868, 
            "paired_qc_failed": 0, 
            "read1": 75898434, 
            "read1_qc_failed": 0, 
            "read2": 75898434, 
            "read2_qc_failed": 0, 
            "paired_properly": 133771716, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 88.13, 
            "with_itself": 147217930, 
            "with_itself_qc_failed": 0, 
            "singletons": 1450468, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.96, 
            "diff_chroms": 9794119, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 51493195, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1813503, 
            "paired_opt_dupes": 1838, 
            "dupes_pct": 0.035218
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 59552755, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 664939, 
            "paired_opt_dupes": 1391, 
            "dupes_pct": 0.011166
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 51434604, 
            "distinct_read_pairs": 49629643, 
            "one_read_pair": 47879035, 
            "two_read_pair": 1697923, 
            "NRF": 0.964908, 
            "PBC1": 0.964727, 
            "PBC2": 28.19859
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 59447716, 
            "distinct_read_pairs": 58822994, 
            "one_read_pair": 58234243, 
            "two_read_pair": 574045, 
            "NRF": 0.989491, 
            "PBC1": 0.989991, 
            "PBC2": 101.445432
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 99359384, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 99359384, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 99359384, 
            "paired_qc_failed": 0, 
            "read1": 49679692, 
            "read1_qc_failed": 0, 
            "read2": 49679692, 
            "read2_qc_failed": 0, 
            "paired_properly": 99359384, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 99359384, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 117775632, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 117775632, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 117775632, 
            "paired_qc_failed": 0, 
            "read1": 58887816, 
            "read1_qc_failed": 0, 
            "read2": 58887816, 
            "read2_qc_failed": 0, 
            "paired_properly": 117775632, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 117775632, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 156121, 
        "Np": 0, 
        "N_opt": 156121, 
        "N_consv": 156121, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -5, 
            "corr_est_frag_len": 0.17410158770353, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.171775, 
            "argmin_corr": 1500, 
            "min_corr": 0.1661918, 
            "NSC": 1.047594, 
            "RSC": 1.41671
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.317008375418
        }, 
        "rep1-pr1": {
            "FRiP": 0.287457310796
        }, 
        "rep1-pr2": {
            "FRiP": 0.287167012005
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.269590927745
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.26247063046, 
            "auc": 0.495920535317, 
            "ch_div": 0.103910098522, 
            "elbow_pt": 0.0, 
            "jsd": 0.663407251615, 
            "syn_auc": 0.499807883175, 
            "syn_elbow_pt": 0.175578653244, 
            "syn_jsd": 0.311327975724
        }
    ]
}