/Martin Hirst/PX0720_TTAGGC_10_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1656907220 | 100.00 % | 828453610 | 100.00 % | 828453610 | 100.00 % |
| General Reads | 1607058860 | 96.99 % | 815367187 | 98.42 % | 791691673 | 95.56 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10200189 | 0.62 % | 5168775 | 0.62 % | 5031414 | 0.61 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 39648171 | 2.39 % | 7917648 | 0.96 % | 31730523 | 3.83 % |
| Bisulfite_reads C2T | 819997993 | 49.49 % | 415968338 | 50.21 % | 404029655 | 48.77 % |
| Bisulfite_reads G2A | 797261056 | 48.12 % | 404567624 | 48.83 % | 392693432 | 47.40 % |
| Concept | Value |
|---|---|
| Unique Fragments | 324788058 |
| Average Unique | 39.20 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 87749218332 | 35.07 % | 45481926351 | 36.36 % | 42267291981 | 33.79 % |
| Base Counts Overall C | 36292794216 | 14.51 % | 19550487784 | 15.63 % | 16742306432 | 13.38 % |
| Base Counts Overall G | 39630368187 | 15.84 % | 17968974138 | 14.36 % | 21661394049 | 17.32 % |
| Base Counts Overall T | 84837958610 | 33.91 % | 41257618701 | 32.98 % | 43580339909 | 34.84 % |
| Base Counts Overall N | 1682650875 | 0.67 % | 837488136 | 0.67 % | 845162739 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9715016330368215 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 526741053 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
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| LANE REPORTS |
|---|
| HF7JYCCXY_6_2 |
| HF7JYCCXY_8_2 |
| HF7JYCCXY_5_2 |
| HHFYJCCXY_4_2 |
| HHFYJCCXY_6_2 |
| HHFYJCCXY_7_2 |
| HHFYJCCXY_5_2 |
| HHFYJCCXY_8_2 |
| HCVFLCCXY_8_2 |
| HF7JYCCXY_7_2 |