{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 30566918, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23380042, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 76.49, 
            "paired": 30566918, 
            "paired_qc_failed": 0, 
            "read1": 15283459, 
            "read1_qc_failed": 0, 
            "read2": 15283459, 
            "read2_qc_failed": 0, 
            "paired_properly": 22451719, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 73.45, 
            "with_itself": 23115389, 
            "with_itself_qc_failed": 0, 
            "singletons": 264653, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.87, 
            "diff_chroms": 90009, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 73857574, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 71880916, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.32, 
            "paired": 73857574, 
            "paired_qc_failed": 0, 
            "read1": 36928787, 
            "read1_qc_failed": 0, 
            "read2": 36928787, 
            "read2_qc_failed": 0, 
            "paired_properly": 56693280, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 76.76, 
            "with_itself": 70763351, 
            "with_itself_qc_failed": 0, 
            "singletons": 1117565, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.51, 
            "diff_chroms": 11478644, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 10113157, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 2760253, 
            "paired_opt_dupes": 955, 
            "dupes_pct": 0.272937
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 24996827, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 241052, 
            "paired_opt_dupes": 1015, 
            "dupes_pct": 0.009643
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 10109352, 
            "distinct_read_pairs": 7350093, 
            "one_read_pair": 5212858, 
            "two_read_pair": 1638289, 
            "NRF": 0.727059, 
            "PBC1": 0.709223, 
            "PBC2": 3.181892
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 24993555, 
            "distinct_read_pairs": 24752593, 
            "one_read_pair": 24516128, 
            "two_read_pair": 233547, 
            "NRF": 0.990359, 
            "PBC1": 0.990447, 
            "PBC2": 104.972995
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 14705808, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 14705808, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 14705808, 
            "paired_qc_failed": 0, 
            "read1": 7352904, 
            "read1_qc_failed": 0, 
            "read2": 7352904, 
            "read2_qc_failed": 0, 
            "paired_properly": 14705808, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 14705808, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 49511550, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 49511550, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 49511550, 
            "paired_qc_failed": 0, 
            "read1": 24755775, 
            "read1_qc_failed": 0, 
            "read2": 24755775, 
            "read2_qc_failed": 0, 
            "paired_properly": 49511550, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 49511550, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 60959, 
        "Np": 0, 
        "N_opt": 60959, 
        "N_consv": 60959, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 11827824, 
            "est_frag_len": 145, 
            "corr_est_frag_len": 0.134106214955723, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1147597, 
            "argmin_corr": 1500, 
            "min_corr": 0.103808, 
            "NSC": 1.291868, 
            "RSC": 2.766528
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.261501080531
        }, 
        "rep1-pr1": {
            "FRiP": 0.339025552333
        }, 
        "rep1-pr2": {
            "FRiP": 0.338955757288
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.141999311029
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.193211932818, 
            "auc": 0.489406176905, 
            "ch_div": 0.334318319951, 
            "elbow_pt": 1.54602623296e-75, 
            "jsd": 0.662892661783, 
            "syn_auc": 0.506717391302, 
            "syn_elbow_pt": 0.170385337596, 
            "syn_jsd": 0.313276321278
        }
    ]
}