{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 134651184, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 132774467, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.61, 
            "paired": 134651184, 
            "paired_qc_failed": 0, 
            "read1": 67325592, 
            "read1_qc_failed": 0, 
            "read2": 67325592, 
            "read2_qc_failed": 0, 
            "paired_properly": 131711609, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.82, 
            "with_itself": 131999060, 
            "with_itself_qc_failed": 0, 
            "singletons": 775407, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.58, 
            "diff_chroms": 48509, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 199901914, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 196913274, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.5, 
            "paired": 199901914, 
            "paired_qc_failed": 0, 
            "read1": 99950957, 
            "read1_qc_failed": 0, 
            "read2": 99950957, 
            "read2_qc_failed": 0, 
            "paired_properly": 192680236, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.39, 
            "with_itself": 195797646, 
            "with_itself_qc_failed": 0, 
            "singletons": 1115628, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.56, 
            "diff_chroms": 160817, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 58624740, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1541571, 
            "paired_opt_dupes": 5623, 
            "dupes_pct": 0.026296
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 85641364, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 851188, 
            "paired_opt_dupes": 5480, 
            "dupes_pct": 0.009939
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 58607178, 
            "distinct_read_pairs": 57066474, 
            "one_read_pair": 55566318, 
            "two_read_pair": 1463181, 
            "NRF": 0.973711, 
            "PBC1": 0.973712, 
            "PBC2": 37.97638
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 85586700, 
            "distinct_read_pairs": 84746379, 
            "one_read_pair": 83940371, 
            "two_read_pair": 790369, 
            "NRF": 0.990182, 
            "PBC1": 0.990489, 
            "PBC2": 106.204027
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 114166338, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 114166338, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 114166338, 
            "paired_qc_failed": 0, 
            "read1": 57083169, 
            "read1_qc_failed": 0, 
            "read2": 57083169, 
            "read2_qc_failed": 0, 
            "paired_properly": 114166338, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 114166338, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 169580352, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 169580352, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 169580352, 
            "paired_qc_failed": 0, 
            "read1": 84790176, 
            "read1_qc_failed": 0, 
            "read2": 84790176, 
            "read2_qc_failed": 0, 
            "paired_properly": 169580352, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 169580352, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 147182, 
        "Np": 0, 
        "N_opt": 147182, 
        "N_consv": 147182, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -5, 
            "corr_est_frag_len": 0.177164440042496, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1809356, 
            "argmin_corr": 1500, 
            "min_corr": 0.1713004, 
            "NSC": 1.034233, 
            "RSC": 0.6086058
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.293187355862
        }, 
        "rep1-pr1": {
            "FRiP": 0.246633093425
        }, 
        "rep1-pr2": {
            "FRiP": 0.246512523395
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.208835574343
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.257228511913, 
            "auc": 0.49619398907, 
            "ch_div": 0.097833171391, 
            "elbow_pt": 0.0, 
            "jsd": 0.628428279532, 
            "syn_auc": 0.496771170237, 
            "syn_elbow_pt": 0.165123910405, 
            "syn_jsd": 0.319883513786
        }
    ]
}