/CEMT/A75625_1_lane_gembs/HKMWJALXX_1_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1008494274 | 100.00 % | 504247137 | 100.00 % | 504247137 | 100.00 % |
| General Reads | 985364372 | 97.71 % | 497273929 | 98.62 % | 488090443 | 96.80 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 9213995 | 0.91 % | 4644727 | 0.92 % | 4569268 | 0.91 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 13915907 | 1.38 % | 2328481 | 0.46 % | 11587426 | 2.30 % |
| Bisulfite_reads C2T | 508592383 | 50.43 % | 256548210 | 50.88 % | 252044173 | 49.98 % |
| Bisulfite_reads G2A | 485985984 | 48.19 % | 245370446 | 48.66 % | 240615538 | 47.72 % |
| Concept | Value |
|---|---|
| Unique Fragments | 432828606 |
| Average Unique | 85.84 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 58300359832 | 38.28 % | 22773625408 | 29.91 % | 35526734424 | 46.66 % |
| Base Counts Overall C | 16606205831 | 10.90 % | 593525480 | 0.78 % | 16012680351 | 21.03 % |
| Base Counts Overall G | 16776098557 | 11.02 % | 15771748765 | 20.71 % | 1004349792 | 1.32 % |
| Base Counts Overall T | 59563075462 | 39.11 % | 36485535778 | 47.92 % | 23077539684 | 30.31 % |
| Base Counts Overall N | 1036895692 | 0.68 % | 516882256 | 0.68 % | 520013436 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9889962058342864 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 480914705 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 504247137 |
| 150 | 504247137 |
| Insert Size Histogram |
|---|
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