{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 77223226, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 74778035, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.83, 
            "paired": 77223226, 
            "paired_qc_failed": 0, 
            "read1": 38611613, 
            "read1_qc_failed": 0, 
            "read2": 38611613, 
            "read2_qc_failed": 0, 
            "paired_properly": 72180010, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 93.47, 
            "with_itself": 74076335, 
            "with_itself_qc_failed": 0, 
            "singletons": 701700, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.91, 
            "diff_chroms": 1108145, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 32633358, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32017375, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.11, 
            "paired": 32633358, 
            "paired_qc_failed": 0, 
            "read1": 16316679, 
            "read1_qc_failed": 0, 
            "read2": 16316679, 
            "read2_qc_failed": 0, 
            "paired_properly": 31194037, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.59, 
            "with_itself": 31710601, 
            "with_itself_qc_failed": 0, 
            "singletons": 306774, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.94, 
            "diff_chroms": 307689, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 28086723, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 616936, 
            "paired_opt_dupes": 2219, 
            "dupes_pct": 0.021965
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 13749916, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 466098, 
            "paired_opt_dupes": 702, 
            "dupes_pct": 0.033898
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 28064948, 
            "distinct_read_pairs": 27450005, 
            "one_read_pair": 26875950, 
            "two_read_pair": 557456, 
            "NRF": 0.978089, 
            "PBC1": 0.979087, 
            "PBC2": 48.211787
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 13728708, 
            "distinct_read_pairs": 13265289, 
            "one_read_pair": 12815823, 
            "two_read_pair": 436590, 
            "NRF": 0.966245, 
            "PBC1": 0.966117, 
            "PBC2": 29.354367
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 54939574, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 54939574, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 54939574, 
            "paired_qc_failed": 0, 
            "read1": 27469787, 
            "read1_qc_failed": 0, 
            "read2": 27469787, 
            "read2_qc_failed": 0, 
            "paired_properly": 54939574, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 54939574, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 26567636, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26567636, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 26567636, 
            "paired_qc_failed": 0, 
            "read1": 13283818, 
            "read1_qc_failed": 0, 
            "read2": 13283818, 
            "read2_qc_failed": 0, 
            "paired_properly": 26567636, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 26567636, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 113571, 
        "Np": 0, 
        "N_opt": 113571, 
        "N_consv": 113571, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -10, 
            "corr_est_frag_len": 0.191269232037164, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2030235, 
            "argmin_corr": 1500, 
            "min_corr": 0.1762372, 
            "NSC": 1.085294, 
            "RSC": 0.5611836
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.258089151532
        }, 
        "rep1-pr1": {
            "FRiP": 0.276684821125
        }, 
        "rep1-pr2": {
            "FRiP": 0.276937263834
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.219911690362
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.201782884291, 
            "auc": 0.494513735665, 
            "ch_div": 0.159793433125, 
            "elbow_pt": 3.22387198481e-285, 
            "jsd": 0.678335869102, 
            "syn_auc": 0.501619523526, 
            "syn_elbow_pt": 0.103649875003, 
            "syn_jsd": 0.386457609493
        }
    ]
}
