{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 159994800, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 147182220, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.99, 
            "paired": 159994800, 
            "paired_qc_failed": 0, 
            "read1": 79997400, 
            "read1_qc_failed": 0, 
            "read2": 79997400, 
            "read2_qc_failed": 0, 
            "paired_properly": 142543656, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 89.09, 
            "with_itself": 144414748, 
            "with_itself_qc_failed": 0, 
            "singletons": 2767472, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.73, 
            "diff_chroms": 187748, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 192176210, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 189111268, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.41, 
            "paired": 192176210, 
            "paired_qc_failed": 0, 
            "read1": 96088105, 
            "read1_qc_failed": 0, 
            "read2": 96088105, 
            "read2_qc_failed": 0, 
            "paired_properly": 185501344, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.53, 
            "with_itself": 188039217, 
            "with_itself_qc_failed": 0, 
            "singletons": 1072051, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.56, 
            "diff_chroms": 189579, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 49222332, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 2384981, 
            "paired_opt_dupes": 4789, 
            "dupes_pct": 0.048453
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 81981435, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 827349, 
            "paired_opt_dupes": 5795, 
            "dupes_pct": 0.010092
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 49209212, 
            "distinct_read_pairs": 46825171, 
            "one_read_pair": 44666349, 
            "two_read_pair": 2049865, 
            "NRF": 0.951553, 
            "PBC1": 0.953896, 
            "PBC2": 21.789898
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 81951776, 
            "distinct_read_pairs": 81129218, 
            "one_read_pair": 80347579, 
            "two_read_pair": 763930, 
            "NRF": 0.989963, 
            "PBC1": 0.990366, 
            "PBC2": 105.176625
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 93674702, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 93674702, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 93674702, 
            "paired_qc_failed": 0, 
            "read1": 46837351, 
            "read1_qc_failed": 0, 
            "read2": 46837351, 
            "read2_qc_failed": 0, 
            "paired_properly": 93674702, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 93674702, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 162308172, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 162308172, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 162308172, 
            "paired_qc_failed": 0, 
            "read1": 81154086, 
            "read1_qc_failed": 0, 
            "read2": 81154086, 
            "read2_qc_failed": 0, 
            "paired_properly": 162308172, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 162308172, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 270367, 
        "Np": 0, 
        "N_opt": 270367, 
        "N_consv": 270367, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -10, 
            "corr_est_frag_len": 0.21682023993107, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2514563, 
            "argmin_corr": 1500, 
            "min_corr": 0.1993228, 
            "NSC": 1.087785, 
            "RSC": 0.335628
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.510573255342
        }, 
        "rep1-pr1": {
            "FRiP": 0.468603041116
        }, 
        "rep1-pr2": {
            "FRiP": 0.468667130577
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.434406434214
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.19658773922, 
            "auc": 0.495799300482, 
            "ch_div": 0.111321916521, 
            "elbow_pt": 0.0, 
            "jsd": 0.711454264111, 
            "syn_auc": 0.500147480673, 
            "syn_elbow_pt": 0.269637827934, 
            "syn_jsd": 0.420569270193
        }
    ]
}
