/CEMT/A75624_1_lane_gembs

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SAMPLE A75624_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1034774868 100.00 % 517387434 100.00 % 517387434 100.00 %
General Reads 1016441277 98.23 % 511459058 98.85 % 504982219 97.60 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 7196756 0.70 % 3616894 0.70 % 3579862 0.69 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 11136835 1.08 % 2311482 0.45 % 8825353 1.71 %
Bisulfite_reads C2T 523234287 50.57 % 263159889 50.86 % 260074398 50.27 %
Bisulfite_reads G2A 500403746 48.36 % 251916063 48.69 % 248487683 48.03 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 448130453
Average Unique 86.61 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 60316342617 38.60 % 24245457505 31.03 % 36070885112 46.17 %
Base Counts Overall C 16835527864 10.77 % 642438450 0.82 % 16193089414 20.73 %
Base Counts Overall G 16708790939 10.69 % 15847875620 20.29 % 860915319 1.10 %
Base Counts Overall T 61341706972 39.26 % 36864344941 47.19 % 24477362031 31.33 %
Base Counts Overall N 1048636676 0.67 % 525386018 0.67 % 523250658 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9936687530822903
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 496750355



Mapping Quality

Mapping Quality Histogram
A75624_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A75624_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HKNMNALXX_8_1