/Martin Hirst/PX0720_GGCTAC_10_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1792347938 | 100.00 % | 896173969 | 100.00 % | 896173969 | 100.00 % |
| General Reads | 1738262040 | 96.98 % | 882148270 | 98.43 % | 856113770 | 95.53 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10103389 | 0.56 % | 5119683 | 0.57 % | 4983706 | 0.56 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 43982509 | 2.45 % | 8906016 | 0.99 % | 35076493 | 3.91 % |
| Bisulfite_reads C2T | 888225692 | 49.56 % | 450708539 | 50.29 % | 437517153 | 48.82 % |
| Bisulfite_reads G2A | 860139737 | 47.99 % | 436559414 | 48.71 % | 423580323 | 47.27 % |
| Concept | Value |
|---|---|
| Unique Fragments | 346229290 |
| Average Unique | 38.63 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 96230553283 | 35.56 % | 50287936486 | 37.16 % | 45942616797 | 33.95 % |
| Base Counts Overall C | 38418323585 | 14.20 % | 21052013861 | 15.56 % | 17366309724 | 12.83 % |
| Base Counts Overall G | 41543297106 | 15.35 % | 18428828941 | 13.62 % | 23114468165 | 17.08 % |
| Base Counts Overall T | 92632159899 | 34.23 % | 44647560248 | 32.99 % | 47984599651 | 35.46 % |
| Base Counts Overall N | 1820204765 | 0.67 % | 905929783 | 0.67 % | 914274982 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.971009742588944 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 560007698 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
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| LANE REPORTS |
|---|
| HHFYJCCXY_6_2 |
| HHFYJCCXY_5_2 |
| HHFYJCCXY_7_2 |
| HF7JYCCXY_5_2 |
| HHFYJCCXY_4_2 |
| HHFYJCCXY_8_2 |
| HF7JYCCXY_6_2 |
| HCVFLCCXY_8_2 |
| HF7JYCCXY_8_2 |
| HF7JYCCXY_7_2 |