/TFF-PPG/PX0587_ACCGGC_10_lane_gembs/HHCHCCCXY_6_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 186764640 | 100.00 % | 93382320 | 100.00 % | 93382320 | 100.00 % |
| General Reads | 178345424 | 95.49 % | 90971660 | 97.42 % | 87373764 | 93.57 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1323738 | 0.71 % | 678102 | 0.73 % | 645636 | 0.69 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7095478 | 3.80 % | 1732558 | 1.86 % | 5362920 | 5.74 % |
| Bisulfite_reads C2T | 91456046 | 48.97 % | 46637231 | 49.94 % | 44818815 | 47.99 % |
| Bisulfite_reads G2A | 88213116 | 47.23 % | 45012531 | 48.20 % | 43200585 | 46.26 % |
| Concept | Value |
|---|---|
| Unique Fragments | 38165137 |
| Average Unique | 40.87 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 9784938860 | 34.70 % | 5086388782 | 36.07 % | 4698550078 | 33.32 % |
| Base Counts Overall C | 4094864055 | 14.52 % | 2157302346 | 15.30 % | 1937561709 | 13.74 % |
| Base Counts Overall G | 4561061499 | 16.17 % | 2081333500 | 14.76 % | 2479727999 | 17.59 % |
| Base Counts Overall T | 9571938959 | 33.94 % | 4681659453 | 33.20 % | 4890279506 | 34.68 % |
| Base Counts Overall N | 188657267 | 0.67 % | 94046239 | 0.67 % | 94611028 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9720422144136641 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 58485442 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 93382320 |
| 150 | 93382320 |
| Insert Size Histogram |
|---|
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