/TFF-PPG/PX0587_CAACTA_10_lane_gembs/HHCHCCCXY_5_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 213016756 | 100.00 % | 106508378 | 100.00 % | 106508378 | 100.00 % |
| General Reads | 204141293 | 95.83 % | 103763268 | 97.42 % | 100378025 | 94.24 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1838445 | 0.86 % | 937461 | 0.88 % | 900984 | 0.85 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7037018 | 3.30 % | 1807649 | 1.70 % | 5229369 | 4.91 % |
| Bisulfite_reads C2T | 104916564 | 49.25 % | 53319270 | 50.06 % | 51597294 | 48.44 % |
| Bisulfite_reads G2A | 101063174 | 47.44 % | 51381459 | 48.24 % | 49681715 | 46.65 % |
| Concept | Value |
|---|---|
| Unique Fragments | 45078352 |
| Average Unique | 42.32 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 11256124671 | 34.99 % | 5833303641 | 36.27 % | 5422821030 | 33.72 % |
| Base Counts Overall C | 4605874753 | 14.32 % | 2427496976 | 15.09 % | 2178377777 | 13.54 % |
| Base Counts Overall G | 5087383124 | 15.82 % | 2344079738 | 14.58 % | 2743303386 | 17.06 % |
| Base Counts Overall T | 11000943094 | 34.20 % | 5370660715 | 33.39 % | 5630282379 | 35.01 % |
| Base Counts Overall N | 215204514 | 0.67 % | 107224008 | 0.67 % | 107980506 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9744400549885986 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 68238446 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 106508378 |
| 150 | 106508378 |
| Insert Size Histogram |
|---|
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