/TFF-PPG/PX0587_CAACTA_10_lane_gembs/HHCHCCCXY_7_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 214687096 | 100.00 % | 107343548 | 100.00 % | 107343548 | 100.00 % |
| General Reads | 206113587 | 96.01 % | 104538757 | 97.39 % | 101574830 | 94.63 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1854842 | 0.86 % | 943396 | 0.88 % | 911446 | 0.85 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6718667 | 3.13 % | 1861395 | 1.73 % | 4857272 | 4.52 % |
| Bisulfite_reads C2T | 105911514 | 49.33 % | 53706600 | 50.03 % | 52204914 | 48.63 % |
| Bisulfite_reads G2A | 102056915 | 47.54 % | 51775553 | 48.23 % | 50281362 | 46.84 % |
| Concept | Value |
|---|---|
| Unique Fragments | 45628551 |
| Average Unique | 42.51 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 11349118785 | 35.01 % | 5874297029 | 36.24 % | 5474821756 | 33.78 % |
| Base Counts Overall C | 4652193695 | 14.35 % | 2447175323 | 15.10 % | 2205018372 | 13.60 % |
| Base Counts Overall G | 5114162066 | 15.78 % | 2365766732 | 14.60 % | 2748395334 | 16.96 % |
| Base Counts Overall T | 11085709881 | 34.20 % | 5413355921 | 33.40 % | 5672353960 | 35.00 % |
| Base Counts Overall N | 216567069 | 0.67 % | 108280743 | 0.67 % | 108286326 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9739679903213125 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 69088644 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 107343548 |
| 150 | 107343548 |
| Insert Size Histogram |
|---|
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