/TFF-PPG/PX0587_CAACTA_10_lane_gembs/HHCHCCCXY_8_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 214524448 | 100.00 % | 107262224 | 100.00 % | 107262224 | 100.00 % |
| General Reads | 205769197 | 95.92 % | 104548546 | 97.47 % | 101220651 | 94.37 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1858048 | 0.87 % | 946578 | 0.88 % | 911470 | 0.85 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6897203 | 3.22 % | 1767100 | 1.65 % | 5130103 | 4.78 % |
| Bisulfite_reads C2T | 105741759 | 49.29 % | 53713079 | 50.08 % | 52028680 | 48.51 % |
| Bisulfite_reads G2A | 101885486 | 47.49 % | 51782045 | 48.28 % | 50103441 | 46.71 % |
| Concept | Value |
|---|---|
| Unique Fragments | 45528639 |
| Average Unique | 42.45 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 11344925635 | 35.02 % | 5881258211 | 36.31 % | 5463667424 | 33.73 % |
| Base Counts Overall C | 4642685313 | 14.33 % | 2444184192 | 15.09 % | 2198501121 | 13.57 % |
| Base Counts Overall G | 5120270663 | 15.81 % | 2353949368 | 14.53 % | 2766321295 | 17.08 % |
| Base Counts Overall T | 11069377516 | 34.17 % | 5409354380 | 33.40 % | 5660023136 | 34.95 % |
| Base Counts Overall N | 215932521 | 0.67 % | 107849673 | 0.67 % | 108082848 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9742027452055894 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 68890575 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 107262224 |
| 150 | 107262224 |
| Insert Size Histogram |
|---|
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