/TFF-PPG/methylation/PX0587_CAACTA_10_lane_gembs
BACK
SAMPLE PX0587_CAACTA_10_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
26798432 |
21851343 |
81.54 % |
| NonRefCpG |
408114 |
162548 |
39.83 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
6008477 |
11.52 % |
5096659 |
11.19 % |
172870 |
23.63 % |
33924 |
8.56 % |
| Intermediate (0.3-0.7) |
6383435 |
12.24 % |
4405719 |
9.67 % |
147156 |
20.12 % |
49962 |
12.61 % |
| Methylated (0.7-1) |
39760401 |
76.24 % |
36051554 |
79.14 % |
411430 |
56.25 % |
312351 |
78.83 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.890 |
|
0.900 |
|
0.770 |
|
0.890 |
|