/EXTERNAL CREST/K006474_1_lane_gembs/JKU052.Bisulfite-Seq.DNA_Methylation.JGAX00000016560.JKU052_WGBS

BACK

SAMPLE K006474_1_lane_gembs LANE JKU052.Bisulfite-Seq.DNA_Methylation.JGAX00000016560.JKU052_WGBS

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 415677929 100.00 % 415677929 100.00 % 0 0.00 %
General Reads 402940293 96.94 % 402940293 96.94 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 4392995 1.06 % 4392995 1.06 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8344641 2.01 % 8344641 2.01 % 0 0.00 %
Bisulfite_reads C2T 202846317 48.80 % 202846317 48.80 % 0 0.00 %
Bisulfite_reads G2A 204486971 49.19 % 204486971 49.19 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 306513967
Average Unique 75.25 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 21083870655 49.73 %
Base Counts Overall C 9281501556 21.89 %
Base Counts Overall G 364529995 0.86 %
Base Counts Overall T 11235763476 26.50 %
Base Counts Overall N 433483076 1.02 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8360392252284228
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
JKU052.Bisulfite-Seq.DNA_Methylation.JGAX00000016560.JKU052_WGBS.mapq.png



Read Length

Read Length Reads
101 415677929