/EXTERNAL CREST/K006473_1_lane_gembs/JKU051.Bisulfite-Seq.DNA_Methylation.JGAX00000016557.JKU051_WGBS

BACK

SAMPLE K006473_1_lane_gembs LANE JKU051.Bisulfite-Seq.DNA_Methylation.JGAX00000016557.JKU051_WGBS

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 318617265 100.00 % 318617265 100.00 % 0 0.00 %
General Reads 309697897 97.20 % 309697897 97.20 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 2336107 0.73 % 2336107 0.73 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 6583261 2.07 % 6583261 2.07 % 0 0.00 %
Bisulfite_reads C2T 155475607 48.80 % 155475607 48.80 % 0 0.00 %
Bisulfite_reads G2A 156558397 49.14 % 156558397 49.14 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 238499180
Average Unique 76.43 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 15135242234 48.97 %
Base Counts Overall C 6676614988 21.60 %
Base Counts Overall G 285219810 0.92 %
Base Counts Overall T 8168339122 26.43 %
Base Counts Overall N 640458551 2.07 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8578995016224495
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
JKU051.Bisulfite-Seq.DNA_Methylation.JGAX00000016557.JKU051_WGBS.mapq.png



Read Length

Read Length Reads
96 318617265