/EXTERNAL CREST/K006470_1_lane_gembs/JKU048.Bisulfite-Seq.DNA_Methylation.JGAX00000016548.JKU048_WGBS

BACK

SAMPLE K006470_1_lane_gembs LANE JKU048.Bisulfite-Seq.DNA_Methylation.JGAX00000016548.JKU048_WGBS

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 276125458 100.00 % 276125458 100.00 % 0 0.00 %
General Reads 268897904 97.38 % 268897904 97.38 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1987333 0.72 % 1987333 0.72 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 5240221 1.90 % 5240221 1.90 % 0 0.00 %
Bisulfite_reads C2T 134831954 48.83 % 134831954 48.83 % 0 0.00 %
Bisulfite_reads G2A 136053283 49.27 % 136053283 49.27 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 206312504
Average Unique 76.16 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 13260502903 49.51 %
Base Counts Overall C 5877835848 21.95 %
Base Counts Overall G 241555086 0.90 %
Base Counts Overall T 7125209899 26.60 %
Base Counts Overall N 279065690 1.04 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8570169464387132
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
JKU048.Bisulfite-Seq.DNA_Methylation.JGAX00000016548.JKU048_WGBS.mapq.png



Read Length

Read Length Reads
96 276125458