/EXTERNAL CREST/K006477_1_lane_gembs/CT27-ST.Bisulfite-Seq.DNA_Methylation.JGAX00000015186.CT27-ST_WGBS

BACK

SAMPLE K006477_1_lane_gembs LANE CT27-ST.Bisulfite-Seq.DNA_Methylation.JGAX00000015186.CT27-ST_WGBS

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 376135122 100.00 % 376135122 100.00 % 0 0.00 %
General Reads 364968180 97.03 % 364968180 97.03 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 3472408 0.92 % 3472408 0.92 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 7694534 2.05 % 7694534 2.05 % 0 0.00 %
Bisulfite_reads C2T 183343068 48.74 % 183343068 48.74 % 0 0.00 %
Bisulfite_reads G2A 185097520 49.21 % 185097520 49.21 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 280887307
Average Unique 76.24 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 18151562302 49.75 %
Base Counts Overall C 7953505891 21.80 %
Base Counts Overall G 264549396 0.73 %
Base Counts Overall T 9728697005 26.66 %
Base Counts Overall N 386792240 1.06 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8518268159727693
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
CT27-ST.Bisulfite-Seq.DNA_Methylation.JGAX00000015186.CT27-ST_WGBS.mapq.png



Read Length

Read Length Reads
96 376135122