/EXTERNAL CREST/K006476_1_lane_gembs/CT27.Bisulfite-Seq.DNA_Methylation.JGAX00000015176.CT27_WGBS

BACK

SAMPLE K006476_1_lane_gembs LANE CT27.Bisulfite-Seq.DNA_Methylation.JGAX00000015176.CT27_WGBS

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 725797809 100.00 % 725797809 100.00 % 0 0.00 %
General Reads 701823633 96.70 % 701823633 96.70 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 6037107 0.83 % 6037107 0.83 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 17937069 2.47 % 17937069 2.47 % 0 0.00 %
Bisulfite_reads C2T 352357734 48.55 % 352357734 48.55 % 0 0.00 %
Bisulfite_reads G2A 355503006 48.98 % 355503006 48.98 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 535000445
Average Unique 75.58 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 35395636333 49.76 %
Base Counts Overall C 15467113811 21.75 %
Base Counts Overall G 470749543 0.66 %
Base Counts Overall T 19060358417 26.80 %
Base Counts Overall N 734327178 1.03 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.852727285681975
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
CT27.Bisulfite-Seq.DNA_Methylation.JGAX00000015176.CT27_WGBS.mapq.png



Read Length

Read Length Reads
97 725797809