{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 162089402, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 160638580, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.1, 
            "paired": 162089402, 
            "paired_qc_failed": 0, 
            "read1": 81044701, 
            "read1_qc_failed": 0, 
            "read2": 81044701, 
            "read2_qc_failed": 0, 
            "paired_properly": 150031776, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 92.56, 
            "with_itself": 159960609, 
            "with_itself_qc_failed": 0, 
            "singletons": 677971, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.42, 
            "diff_chroms": 6666929, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 110823572, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 109263081, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.59, 
            "paired": 110823572, 
            "paired_qc_failed": 0, 
            "read1": 55411786, 
            "read1_qc_failed": 0, 
            "read2": 55411786, 
            "read2_qc_failed": 0, 
            "paired_properly": 99432483, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 89.72, 
            "with_itself": 108603175, 
            "with_itself_qc_failed": 0, 
            "singletons": 659906, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.6, 
            "diff_chroms": 6017113, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 70501188, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1817152, 
            "paired_opt_dupes": 3951, 
            "dupes_pct": 0.025775
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 44416373, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 432626, 
            "paired_opt_dupes": 1846, 
            "dupes_pct": 0.00974
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 70486152, 
            "distinct_read_pairs": 68670426, 
            "one_read_pair": 66968126, 
            "two_read_pair": 1604213, 
            "NRF": 0.97424, 
            "PBC1": 0.975211, 
            "PBC2": 41.745159
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 44406721, 
            "distinct_read_pairs": 43974914, 
            "one_read_pair": 43564699, 
            "two_read_pair": 402407, 
            "NRF": 0.990276, 
            "PBC1": 0.990672, 
            "PBC2": 108.260291
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 137368072, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 137368072, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 137368072, 
            "paired_qc_failed": 0, 
            "read1": 68684036, 
            "read1_qc_failed": 0, 
            "read2": 68684036, 
            "read2_qc_failed": 0, 
            "paired_properly": 137368072, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 137368072, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 87967494, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 87967494, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 87967494, 
            "paired_qc_failed": 0, 
            "read1": 43983747, 
            "read1_qc_failed": 0, 
            "read2": 43983747, 
            "read2_qc_failed": 0, 
            "paired_properly": 87967494, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 87967494, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 243821, 
        "Np": 0, 
        "N_opt": 243821, 
        "N_consv": 243821, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.19727833215688, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.1892104, 
            "argmin_corr": 1500, 
            "min_corr": 0.1867282, 
            "NSC": 1.0565, 
            "RSC": 4.250308
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.710445913063
        }, 
        "rep1-pr1": {
            "FRiP": 0.720075757212
        }, 
        "rep1-pr2": {
            "FRiP": 0.719960656717
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.690458837404
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.107384855664, 
            "auc": 0.496530638882, 
            "ch_div": 0.254440259418, 
            "elbow_pt": 0.0, 
            "jsd": 0.781319722669, 
            "syn_auc": 0.497696026165, 
            "syn_elbow_pt": 0.431537900023, 
            "syn_jsd": 0.561987483005
        }
    ]
}
