/CEMT/E00610_8_lane_gembs

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SAMPLE E00610_8_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1794549702 100.00 % 897274851 100.00 % 897274851 100.00 %
General Reads 1732980723 96.57 % 873040049 97.30 % 859940674 95.84 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 11458281 0.64 % 5808254 0.65 % 5650027 0.63 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 50110698 2.79 % 18426548 2.05 % 31684150 3.53 %
Bisulfite_reads C2T 884528301 49.29 % 445544224 49.66 % 438984077 48.92 %
Bisulfite_reads G2A 859910703 47.92 % 433304079 48.29 % 426606624 47.54 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 286202774
Average Unique 31.90 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 95390293837 35.20 % 49003124022 36.17 % 46387169815 34.24 %
Base Counts Overall C 40521020529 14.95 % 21579734248 15.93 % 18941286281 13.98 %
Base Counts Overall G 41741582816 15.40 % 19494349716 14.39 % 22247233100 16.42 %
Base Counts Overall T 91496493064 33.77 % 44501300495 32.85 % 46995192569 34.69 %
Base Counts Overall N 1827614756 0.67 % 909994020 0.67 % 917620736 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9508939815867615
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 483207898



Mapping Quality

Mapping Quality Histogram
E00610_8_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
E00610_8_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HYYLHCCXY_2_2
HYYLHCCXY_4_2
HYCF2CCXY_2_2
HYYLHCCXY_6_2
HYYLHCCXY_8_2
HYYLHCCXY_7_2
HYYLHCCXY_5_2
HYYLHCCXY_3_2