{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 104027878, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 102050894, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.1, 
            "paired": 104027878, 
            "paired_qc_failed": 0, 
            "read1": 52013939, 
            "read1_qc_failed": 0, 
            "read2": 52013939, 
            "read2_qc_failed": 0, 
            "paired_properly": 77375454, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 74.38, 
            "with_itself": 100758674, 
            "with_itself_qc_failed": 0, 
            "singletons": 1292220, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.24, 
            "diff_chroms": 17812268, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 104183442, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 101561725, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.48, 
            "paired": 104183442, 
            "paired_qc_failed": 0, 
            "read1": 52091721, 
            "read1_qc_failed": 0, 
            "read2": 52091721, 
            "read2_qc_failed": 0, 
            "paired_properly": 83193856, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 79.85, 
            "with_itself": 100020683, 
            "with_itself_qc_failed": 0, 
            "singletons": 1541042, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.48, 
            "diff_chroms": 13877524, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 33713500, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 832235, 
            "paired_opt_dupes": 2353, 
            "dupes_pct": 0.024686
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 36259719, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 570314, 
            "paired_opt_dupes": 2544, 
            "dupes_pct": 0.015729
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 33701128, 
            "distinct_read_pairs": 32869820, 
            "one_read_pair": 32063702, 
            "two_read_pair": 783518, 
            "NRF": 0.975333, 
            "PBC1": 0.975475, 
            "PBC2": 40.922738
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 36250789, 
            "distinct_read_pairs": 35680935, 
            "one_read_pair": 35127299, 
            "two_read_pair": 542681, 
            "NRF": 0.98428, 
            "PBC1": 0.984484, 
            "PBC2": 64.729185
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 65762530, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 65762530, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 65762530, 
            "paired_qc_failed": 0, 
            "read1": 32881265, 
            "read1_qc_failed": 0, 
            "read2": 32881265, 
            "read2_qc_failed": 0, 
            "paired_properly": 65762530, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 65762530, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 71378810, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 71378810, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 71378810, 
            "paired_qc_failed": 0, 
            "read1": 35689405, 
            "read1_qc_failed": 0, 
            "read2": 35689405, 
            "read2_qc_failed": 0, 
            "paired_properly": 71378810, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 71378810, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 138783, 
        "Np": 0, 
        "N_opt": 138783, 
        "N_consv": 138783, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.179158736176387, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1802426, 
            "argmin_corr": 1500, 
            "min_corr": 0.1715665, 
            "NSC": 1.044253, 
            "RSC": 0.8750715
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.226392494611
        }, 
        "rep1-pr1": {
            "FRiP": 0.206748275059
        }, 
        "rep1-pr2": {
            "FRiP": 0.207287766876
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0984923800318
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.246565541628, 
            "auc": 0.494984683954, 
            "ch_div": 0.135832556949, 
            "elbow_pt": 0.0, 
            "jsd": 0.601752961922, 
            "syn_auc": 0.500096983775, 
            "syn_elbow_pt": 0.126281718264, 
            "syn_jsd": 0.319558514338
        }
    ]
}