/CEMT/B04745_2_lane_gembs

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SAMPLE B04745_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1533043744 100.00 % 766521872 100.00 % 766521872 100.00 %
General Reads 1506894583 98.29 % 757375415 98.81 % 749519168 97.78 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 11080729 0.72 % 5555255 0.72 % 5525474 0.72 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 15068432 0.98 % 3591202 0.47 % 11477230 1.50 %
Bisulfite_reads C2T 775425982 50.58 % 389286164 50.79 % 386139818 50.38 %
Bisulfite_reads G2A 742549330 48.44 % 373644506 48.75 % 368904824 48.13 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 646039112
Average Unique 84.28 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 88531019546 38.24 % 40777151583 35.23 % 47753867963 41.26 %
Base Counts Overall C 26842122326 11.60 % 1762160709 1.52 % 25079961617 21.67 %
Base Counts Overall G 24121511850 10.42 % 23014555568 19.88 % 1106956282 0.96 %
Base Counts Overall T 90431441774 39.07 % 49412476195 42.69 % 41018965579 35.44 %
Base Counts Overall N 1563509848 0.68 % 778458617 0.67 % 785051231 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.994954294604158
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 728445335



Mapping Quality

Mapping Quality Histogram
B04745_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
B04745_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HWT22CCXY_7_2
HWNTVCCXY_1_2