/CEMT/B04745_2_lane_gembs/HWT22CCXY_7_2

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SAMPLE B04745_2_lane_gembs LANE HWT22CCXY_7_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 921300732 100.00 % 460650366 100.00 % 460650366 100.00 %
General Reads 905863224 98.32 % 455357419 98.85 % 450505805 97.80 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 6706810 0.73 % 3363300 0.73 % 3343510 0.73 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8730698 0.95 % 1929647 0.42 % 6801051 1.48 %
Bisulfite_reads C2T 464428986 50.41 % 233213485 50.63 % 231215501 50.19 %
Bisulfite_reads G2A 448141048 48.64 % 225507234 48.95 % 222633814 48.33 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 389620097
Average Unique 84.58 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 53373630255 38.37 % 24593010196 35.36 % 28780620059 41.38 %
Base Counts Overall C 15594226833 11.21 % 728559558 1.05 % 14865667275 21.37 %
Base Counts Overall G 14583492034 10.48 % 13907141909 19.99 % 676350125 0.97 %
Base Counts Overall T 54629109240 39.27 % 29863114292 42.93 % 24765994948 35.60 %
Base Counts Overall N 935952170 0.67 % 466379311 0.67 % 469572859 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9948237375294487
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 437613368



Mapping Quality

Mapping Quality Histogram
HWT22CCXY_7_2.mapq.png



Read Length

Read Length Reads
150 460650366
150 460650366



Insert Size Plot

Insert Size Histogram
HWT22CCXY_7_2.isize.png