{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 64476310, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 59295179, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.96, 
            "paired": 64476310, 
            "paired_qc_failed": 0, 
            "read1": 32238155, 
            "read1_qc_failed": 0, 
            "read2": 32238155, 
            "read2_qc_failed": 0, 
            "paired_properly": 58820990, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 91.23, 
            "with_itself": 59084704, 
            "with_itself_qc_failed": 0, 
            "singletons": 210475, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.33, 
            "diff_chroms": 34710, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 135365502, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 133317923, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.49, 
            "paired": 135365502, 
            "paired_qc_failed": 0, 
            "read1": 67682751, 
            "read1_qc_failed": 0, 
            "read2": 67682751, 
            "read2_qc_failed": 0, 
            "paired_properly": 128953755, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.26, 
            "with_itself": 132693635, 
            "with_itself_qc_failed": 0, 
            "singletons": 624288, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.46, 
            "diff_chroms": 147654, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 26974093, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3206376, 
            "paired_opt_dupes": 1692, 
            "dupes_pct": 0.118869
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 56839130, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 427070, 
            "paired_opt_dupes": 3620, 
            "dupes_pct": 0.007514
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 26950731, 
            "distinct_read_pairs": 23747944, 
            "one_read_pair": 20963621, 
            "two_read_pair": 2470104, 
            "NRF": 0.881161, 
            "PBC1": 0.882755, 
            "PBC2": 8.486939
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 56788289, 
            "distinct_read_pairs": 56369250, 
            "one_read_pair": 55975158, 
            "two_read_pair": 386103, 
            "NRF": 0.992621, 
            "PBC1": 0.993009, 
            "PBC2": 144.974678
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 47535434, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47535434, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 47535434, 
            "paired_qc_failed": 0, 
            "read1": 23767717, 
            "read1_qc_failed": 0, 
            "read2": 23767717, 
            "read2_qc_failed": 0, 
            "paired_properly": 47535434, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 47535434, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 112824120, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 112824120, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 112824120, 
            "paired_qc_failed": 0, 
            "read1": 56412060, 
            "read1_qc_failed": 0, 
            "read2": 56412060, 
            "read2_qc_failed": 0, 
            "paired_properly": 112824120, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 112824120, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 73489, 
        "Np": 0, 
        "N_opt": 73489, 
        "N_consv": 73489, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.233592006322912, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.1864097, 
            "argmin_corr": 1500, 
            "min_corr": 0.1511557, 
            "NSC": 1.545373, 
            "RSC": 2.338355
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.394713614613
        }, 
        "rep1-pr1": {
            "FRiP": 0.382849878229
        }, 
        "rep1-pr2": {
            "FRiP": 0.382704003117
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.361173831153
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.190788589784, 
            "auc": 0.494112310782, 
            "ch_div": 0.140898994564, 
            "elbow_pt": 1.97176099812e-247, 
            "jsd": 0.75821552598, 
            "syn_auc": 0.504194808099, 
            "syn_elbow_pt": 0.352283237723, 
            "syn_jsd": 0.442247524997
        }
    ]
}