/CEMT/B19819_2_lane_gembs

BACK

SAMPLE B19819_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1982254234 100.00 % 991127117 100.00 % 991127117 100.00 %
General Reads 1962043283 98.98 % 986903822 99.57 % 975139461 98.39 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 574746 0.03 % 288960 0.03 % 285786 0.03 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 19636205 0.99 % 3934335 0.40 % 15701870 1.58 %
Bisulfite_reads C2T 1005803972 50.74 % 505654011 51.02 % 500149961 50.46 %
Bisulfite_reads G2A 956814057 48.27 % 481538771 48.58 % 475275286 47.95 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 847235062
Average Unique 85.48 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 114275682954 38.18 % 45535321131 30.43 % 68740361823 45.93 %
Base Counts Overall C 34174768503 11.42 % 1608180736 1.07 % 32566587767 21.76 %
Base Counts Overall G 33865823408 11.31 % 32314968467 21.59 % 1550854941 1.04 %
Base Counts Overall T 114993591075 38.42 % 69195269730 46.23 % 45798321345 30.60 %
Base Counts Overall N 2010523394 0.67 % 1006454603 0.67 % 1004068791 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9959385121892136
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 949269346



Mapping Quality

Mapping Quality Histogram
B19819_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
B19819_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HYYJWCCXY_1_2
HYYJWCCXY_2_2