/CEMT/A95334_2_lane_gembs

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SAMPLE A95334_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 2003838170 100.00 % 1001919085 100.00 % 1001919085 100.00 %
General Reads 1963668601 98.00 % 988098595 98.62 % 975570006 97.37 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 19370114 0.97 % 9720604 0.97 % 9649510 0.96 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 20799455 1.04 % 4099886 0.41 % 16699569 1.67 %
Bisulfite_reads C2T 1013372576 50.57 % 509350434 50.84 % 504022142 50.31 %
Bisulfite_reads G2A 969666139 48.39 % 488468765 48.75 % 481197374 48.03 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 819922073
Average Unique 81.84 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 116902129539 38.64 % 52813889865 34.91 % 64088239674 42.36 %
Base Counts Overall C 32844263343 10.85 % 1284740355 0.85 % 31559522988 20.86 %
Base Counts Overall G 32968697777 10.90 % 31516161335 20.83 % 1452536442 0.96 %
Base Counts Overall T 117818405591 38.94 % 64658567990 42.74 % 53159837601 35.14 %
Base Counts Overall N 2046067420 0.68 % 1016422290 0.67 % 1029645130 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9949152627732173
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 937588154



Mapping Quality

Mapping Quality Histogram
A95334_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A95334_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HWT22CCXY_1_2
HWT22CCXY_2_2