{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 168240748, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 165427791, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.33, 
            "paired": 168240748, 
            "paired_qc_failed": 0, 
            "read1": 84120374, 
            "read1_qc_failed": 0, 
            "read2": 84120374, 
            "read2_qc_failed": 0, 
            "paired_properly": 159063438, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.55, 
            "with_itself": 164420127, 
            "with_itself_qc_failed": 0, 
            "singletons": 1007664, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.6, 
            "diff_chroms": 217964, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 139755050, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 137561007, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.43, 
            "paired": 139755050, 
            "paired_qc_failed": 0, 
            "read1": 69877525, 
            "read1_qc_failed": 0, 
            "read2": 69877525, 
            "read2_qc_failed": 0, 
            "paired_properly": 132606533, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.88, 
            "with_itself": 136829005, 
            "with_itself_qc_failed": 0, 
            "singletons": 732002, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.52, 
            "diff_chroms": 310461, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 68758712, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1442703, 
            "paired_opt_dupes": 3684, 
            "dupes_pct": 0.020982
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 58306381, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 449204, 
            "paired_opt_dupes": 3926, 
            "dupes_pct": 0.007704
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 68737063, 
            "distinct_read_pairs": 67296393, 
            "one_read_pair": 65915111, 
            "two_read_pair": 1335840, 
            "NRF": 0.979041, 
            "PBC1": 0.979475, 
            "PBC2": 49.343567
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 58283535, 
            "distinct_read_pairs": 57836429, 
            "one_read_pair": 57413097, 
            "two_read_pair": 414907, 
            "NRF": 0.992329, 
            "PBC1": 0.992681, 
            "PBC2": 138.375822
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 134632018, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 134632018, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 134632018, 
            "paired_qc_failed": 0, 
            "read1": 67316009, 
            "read1_qc_failed": 0, 
            "read2": 67316009, 
            "read2_qc_failed": 0, 
            "paired_properly": 134632018, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 134632018, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 115714354, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 115714354, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 115714354, 
            "paired_qc_failed": 0, 
            "read1": 57857177, 
            "read1_qc_failed": 0, 
            "read2": 57857177, 
            "read2_qc_failed": 0, 
            "paired_properly": 115714354, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 115714354, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 224526, 
        "Np": 0, 
        "N_opt": 224526, 
        "N_consv": 224526, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 145, 
            "corr_est_frag_len": 0.184592307643014, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1882105, 
            "argmin_corr": 1500, 
            "min_corr": 0.1774677, 
            "NSC": 1.040146, 
            "RSC": 0.6631963
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.265229396987
        }, 
        "rep1-pr1": {
            "FRiP": 0.255493659883
        }, 
        "rep1-pr2": {
            "FRiP": 0.255364054127
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.175836940089
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.248915429458, 
            "auc": 0.496496766894, 
            "ch_div": 0.102724964513, 
            "elbow_pt": 0.0, 
            "jsd": 0.613354925128, 
            "syn_auc": 0.505165957698, 
            "syn_elbow_pt": 0.190811195507, 
            "syn_jsd": 0.334299877543
        }
    ]
}
